RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-229	ENST00000621136	TC2N	Q8N9U0	490 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	NELFB	Q8WX92	580 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	NKIRAS1	Q9NYS0	192 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	ATP8A1	Q9Y2Q0	1164 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	CCDC194	A0A1B0GVG4	234 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	RNMT	O43148	476 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	CREB3	O43889	395 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	GSDMB	Q8TAX9	411 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	ZCWPW1	Q9H0M4	648 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	CCDC13	Q8IYE1	715 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	ZNF473	Q8WTR7	871 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	KIFC2	Q96AC6	838 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	NLRP2	Q9NX02	1062 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	L1RE1	Q9UN81	338 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	JCAD	Q9P266	1359 aa		13.79	□□□□□ -0.2
SYNRG-229	ENST00000621136	MOCS3	O95396	460 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SNX1	Q13596	522 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	LMBR1L	Q6UX01	489 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SYCP3	Q8IZU3	236 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SNRNP27	Q8WVK2	155 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	MAST3	O60307	1309 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	PHF20L1	A8MW92	1017 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136		B4E1Z4	1266 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	TMOD1	P28289	359 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	AKAP4	Q5JQC9	854 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	MFSD4B	Q5TF39	518 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	CYB5D1	Q6P9G0	228 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	ZC3H18	Q86VM9	953 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	METTL16	Q86W50	562 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SUGP1	Q8IWZ8	645 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	KIF2B	Q8N4N8	673 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	TMEM165	Q9HC07	324 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SLC4A4	Q9Y6R1	1079 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	GJC1	P36383	396 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	THEMIS2	Q5TEJ8	643 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	PARD3B	Q8TEW8	1205 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	HPCAL4	Q9UM19	191 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	L3MBTL1	Q9Y468	752 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	KCNJ18	B7U540	433 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	ATP1A1	P05023	1023 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	KCNJ12	Q14500	433 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	CRYM	Q14894	314 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SLC39A14	Q15043	492 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	OTUD6A	Q7L8S5	288 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	TRIM58	Q8NG06	486 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	TSG101	Q99816	390 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	C19orf44	Q9H6X5	657 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	ATG3	Q9NT62	314 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	KLHL14	Q9P2G3	628 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	SCOC	Q9UIL1	159 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	PLAA	Q9Y263	795 aa		13.78	□□□□□ -0.2
SYNRG-229	ENST00000621136	UPP2	O95045	317 aa		13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	FTCD	O95954	541 aa		13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	RASSF7	Q02833	373 aa		13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	COPRS	Q9NQ92	184 aa		13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	LRWD1	Q9UFC0	647 aa		13.77	□□□□□ -0.2
SYNRG-229	ENST00000621136	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	NUTM2E	B1AL46	878 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	BMP6	P22004	513 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	FMR1	Q06787	632 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	RTN1	Q16799	776 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	NAP1L3	Q99457	506 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	LRP2BP	Q9P2M1	347 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	HYOU1	Q9Y4L1	999 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	BTBD18	B2RXH4	712 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	ALDH3A1	P30838	453 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	STX2	P32856	288 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	MAP7	Q14244	749 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	IQUB	Q8NA54	791 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	RMND1	Q9NWS8	449 aa		13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	CWC25	Q9NXE8	425 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	UTP11	Q9Y3A2	253 aa	Known RBP	13.77	□□□□□ -0.21
SYNRG-229	ENST00000621136	USP14	P54578	494 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	SPATA24	Q86W54	205 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	EGFL6	Q8IUX8	553 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	CEP70	Q8NHQ1	597 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	SMC6	Q96SB8	1091 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	CARD10	Q9BWT7	1032 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	ANKZF1	Q9H8Y5	726 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	TUBE1	Q9UJT0	475 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136		M0R2C6	588 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	PPP1R37	O75864	691 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	NDUFA10	O95299	355 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	MSH2	P43246	934 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	DEUP1	Q05D60	604 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	LAMB3	Q13751	1172 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	CAPN12	Q6ZSI9	719 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	UIMC1	Q96RL1	719 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	DSCC1	Q9BVC3	393 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	DENND2A	Q9ULE3	1009 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	UBE2Q2L	H0YL09	131 aa		13.76	□□□□□ -0.21
SYNRG-229	ENST00000621136	LSP1	P33241	339 aa		13.76	□□□□□ -0.21

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