RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RBM8AQ9Y5S9 174 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 PTPRKQ15262 1439 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 UPF3AQ9H1J1 476 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 CFAP74Q9C0B2 1584 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 BACH1O14867 736 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 N4BP1O75113 896 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 EPHB4P54760 987 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 BATF3Q9NR55 127 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 GPATCH8Q9UKJ3 1502 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 DHX32Q7L7V1 743 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 RSAD2Q8WXG1 361 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 ZBTB21Q9ULJ3 1066 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 AOX1Q06278 1338 aa7.84□□□□□ -1.16
COLCA1-205ENST00000620864 CFAP65Q6ZU64 1925 aaKnown RBP7.84□□□□□ -1.16
COLCA1-205ENST00000620864 SERPINB2P05120 415 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 KRT5P13647 590 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 P4HA1P13674 534 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 HSPA6P17066 643 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 MARCKSP29966 332 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 POLE2P56282 527 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 MAP3K10Q02779 954 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 STAMBPL1Q96FJ0 436 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 CTNND2Q9UQB3 1225 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 PPP1R12AO14974 1030 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 DCTN3O75935 186 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 ESRRBO95718 433 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 MCF2P10911 925 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 SDSP20132 328 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 GUCY2CP25092 1073 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 C6orf118Q5T5N4 469 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 KDM5CP41229 1560 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 STRN3Q13033 797 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 DCAF17Q5H9S7 520 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 AKNAD1Q5T1N1 836 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 RAB44Q7Z6P3 723 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 TEX12Q9BXU0 123 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 BZW2Q9Y6E2 419 aaKnown RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 AATKQ6ZMQ8 1374 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 ALDH1B1P30837 517 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 SESN3P58005 492 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 SULF1Q8IWU6 871 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 FAM186BQ8IYM0 893 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 CSGALNACT2Q8N6G5 542 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 CATSPER1Q8NEC5 780 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 INTS9Q9NV88 658 aaKnown RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 MFSD4BQ5TF39 518 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 PRPF38AQ8NAV1 312 aaKnown RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 GIPC2Q8TF65 315 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 ARHGAP26Q9UNA1 814 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 TRPM2O94759 1503 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 GADD45BO75293 160 aaPredicted RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 AKAP4Q5JQC9 854 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 TRIML2Q8N7C3 387 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 PHKBQ93100 1093 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 STOML1Q9UBI4 398 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 KIF28PB7ZC32 967 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 LTKP29376 864 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 DCUN1D2Q6PH85 259 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 NUDCD3Q8IVD9 361 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 CALR3Q96L12 384 aaKnown RBP7.83□□□□□ -1.16
COLCA1-205ENST00000620864 TRIM55Q9BYV6 548 aa7.83□□□□□ -1.16
COLCA1-205ENST00000620864 PHLPP2Q6ZVD8 1323 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 HNRNPCL2B2RXH8 293 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 HNRNPCL1O60812 293 aaKnown RBP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 CHGBP05060 677 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KLHL30Q0D2K2 578 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 LONRF2Q1L5Z9 754 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 ATG16L1Q676U5 607 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 LRRC8BQ6P9F7 803 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 RNF207Q6ZRF8 634 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 SMCR8Q8TEV9 937 aaPredicted RBP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 RNF34Q969K3 372 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 PPWD1Q96BP3 646 aaKnown RBP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 CCDC8Q9H0W5 538 aaPredicted RBP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KCNH3Q9ULD8 1083 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 ATICP31939 592 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 PDE1AP54750 535 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 MKRN3Q13064 507 aaKnown RBP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KLHL29Q96CT2 875 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 LRRC37BQ96QE4 947 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 GNGT2O14610 69 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KRT9P35527 623 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 CASC4Q6P4E1 433 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 SCYL3Q8IZE3 742 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 FAM81BQ96LP2 452 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KIF2CQ99661 725 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 LZTS2Q9BRK4 669 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 ITSN2Q9NZM3 1697 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 CCDC151A5D8V7 595 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 RWDD2BP57060 319 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 UBE3BQ7Z3V4 1068 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KIF9Q9HAQ2 790 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 IFT122Q9HBG6 1241 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 SLC24A3Q9HC58 644 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.82□□□□□ -1.16
COLCA1-205ENST00000620864 M0QZ92 97 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 GPC4O75487 556 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 PRPF6O94906 941 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms