RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 STAG2Q8N3U4 1231 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 CEP112Q8N8E3 955 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ANKRD20A12PQ8NF67 263 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ACBD3Q9H3P7 528 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 MAD2L2Q9UI95 211 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ABL1P00519 1130 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ARHGAP25P42331 645 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 WWC2Q6AWC2 1192 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 NUP88Q99567 741 aaPredicted RBP9.1□□□□□ -0.95
GDNF-208ENST00000620847 GBP3Q9H0R5 595 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 PCDHA6Q9UN73 950 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 PCDHA8Q9Y5H6 950 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 KCNB1Q14721 858 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 SLC35G1Q2M3R5 365 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 SPTY2D1Q68D10 685 aaPredicted RBP9.1□□□□□ -0.95
GDNF-208ENST00000620847 SLC35F6Q8N357 371 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 RASGRP4Q8TDF6 673 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ZSWIM4Q9H7M6 989 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 ANKZF1Q9H8Y5 726 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 MYO1AQ9UBC5 1043 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 NARFQ9UHQ1 456 aa9.1□□□□□ -0.95
GDNF-208ENST00000620847 CTAGE9A4FU28 777 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 KLRC4O43908 158 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 RPS6KA5O75582 802 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 TM4SF1P30408 202 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 DTHD1Q6ZMT9 781 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 MSL3Q8N5Y2 521 aaKnown RBP9.09□□□□□ -0.95
GDNF-208ENST00000620847 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 GEMIN8Q9NWZ8 242 aaKnown RBP9.09□□□□□ -0.95
GDNF-208ENST00000620847 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 JRKLQ9Y4A0 524 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 TNRC6CQ9HCJ0 1690 aaKnown RBP9.09□□□□□ -0.95
GDNF-208ENST00000620847 MYL1P05976 194 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 PARP1P09874 1014 aaKnown RBP9.09□□□□□ -0.95
GDNF-208ENST00000620847 GNAQP50148 359 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 KCNQ4P56696 695 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 UBXN1Q04323 297 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 GALNT17Q6IS24 598 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 DZIP1Q86YF9 867 aaKnown RBP9.09□□□□□ -0.95
GDNF-208ENST00000620847 PPM1EQ8WY54 764 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 DYNLL2Q96FJ2 89 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 SETDB2Q96T68 719 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 TMEM60Q9H2L4 133 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 DEF6Q9H4E7 631 aa9.09□□□□□ -0.95
GDNF-208ENST00000620847 CCDC194A0A1B0GVG4 234 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 TRIM49BA6NDI0 452 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 CYTH3O43739 400 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 KRT9P35527 623 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 PMS1P54277 932 aaKnown RBP9.09□□□□□ -0.96
GDNF-208ENST00000620847 CCDC178Q5BJE1 867 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 NBPF5PQ86XG9 351 aaPredicted RBP9.09□□□□□ -0.96
GDNF-208ENST00000620847 MSANTD4Q8NCY6 345 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 ZNF507Q8TCN5 953 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 KBTBD4Q9NVX7 518 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 PUF60Q9UHX1 559 aaKnown RBP9.09□□□□□ -0.96
GDNF-208ENST00000620847 RAB21Q9UL25 225 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 JAG2Q9Y219 1238 aa9.09□□□□□ -0.96
GDNF-208ENST00000620847 A0A1W2PQC6 194 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 PP2D1A8MPX8 630 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 EIF3CLB5ME19 914 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 STXBP3O00186 592 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 LAD1O00515 517 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 TUBBP07437 444 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 EEF1GP26641 437 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 USP5P45974 858 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 BEND6Q5SZJ8 279 aaPredicted RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 MB21D1Q8N884 522 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 CCDC148Q8NFR7 591 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 SH3RF3Q8TEJ3 882 aaPredicted RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 EIF3CQ99613 913 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 NAPGQ99747 312 aaPredicted RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 THAP9Q9H5L6 903 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 BARHL2Q9NY43 387 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 LGALS16A8MUM7 142 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 PRPHP41219 470 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 GIMAP8Q8ND71 665 aaPredicted RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 DNAJC7Q99615 494 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 CHP1Q99653 195 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 SRP68Q9UHB9 627 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 FAN1Q9Y2M0 1017 aa9.08□□□□□ -0.96
GDNF-208ENST00000620847 REXO2Q9Y3B8 237 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 DDX60LQ5H9U9 1706 aaKnown RBP9.08□□□□□ -0.96
GDNF-208ENST00000620847 TTC26A0AVF1 554 aa9.07□□□□□ -0.96
GDNF-208ENST00000620847 USP17L3A6NCW0 530 aa9.07□□□□□ -0.96
GDNF-208ENST00000620847 USP17L4A6NCW7 530 aa9.07□□□□□ -0.96
GDNF-208ENST00000620847 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
GDNF-208ENST00000620847 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
GDNF-208ENST00000620847 WHAMMP3Q1A5X7 153 aa9.07□□□□□ -0.96
GDNF-208ENST00000620847 INF2Q27J81 1249 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms