RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 GRIN2CQ14957 1233 aa26.18■■□□□ 1.78
SRRT-218ENST00000620394 TJAP1Q5JTD0 557 aa26.18■■□□□ 1.78
SRRT-218ENST00000620394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.18■■□□□ 1.78
SRRT-218ENST00000620394 MROH7Q68CQ1 1323 aa26.17■■□□□ 1.78
SRRT-218ENST00000620394 SYNGAP1Q96PV0 1343 aa26.17■■□□□ 1.78
SRRT-218ENST00000620394 ACLYP53396 1101 aa26.17■■□□□ 1.78
SRRT-218ENST00000620394 SMC5Q8IY18 1101 aa26.17■■□□□ 1.78
SRRT-218ENST00000620394 LRRC47Q8N1G4 583 aaKnown RBP26.17■■□□□ 1.78
SRRT-218ENST00000620394 TTC28Q96AY4 2481 aa26.17■■□□□ 1.78
SRRT-218ENST00000620394 ZNF576Q9H609 170 aa26.16■■□□□ 1.78
SRRT-218ENST00000620394 HELLSQ9NRZ9 838 aa26.16■■□□□ 1.78
SRRT-218ENST00000620394 ANAPC4Q9UJX5 808 aa26.16■■□□□ 1.78
SRRT-218ENST00000620394 TIMP1P01033 207 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 TFAP4Q01664 338 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 SNRNP48Q6IEG0 339 aaKnown RBP26.15■■□□□ 1.78
SRRT-218ENST00000620394 CCDC174Q6PII3 467 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 USP38Q8NB14 1042 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 TIFAQ96CG3 184 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 SLC38A10Q9HBR0 1119 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 FEM1BQ9UK73 627 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 TBX21Q9UL17 535 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 FAM184BQ9ULE4 1060 aa26.15■■□□□ 1.78
SRRT-218ENST00000620394 CST5P28325 142 aaPredicted RBP26.14■■□□□ 1.78
SRRT-218ENST00000620394 ALX1Q15699 326 aa26.14■■□□□ 1.78
SRRT-218ENST00000620394 PPP4R3BQ5MIZ7 849 aa26.14■■□□□ 1.78
SRRT-218ENST00000620394 VPS53Q5VIR6 699 aa26.14■■□□□ 1.78
SRRT-218ENST00000620394 KLHDC9Q8NEP7 349 aa26.14■■□□□ 1.78
SRRT-218ENST00000620394 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.78
SRRT-218ENST00000620394 RIPK3Q9Y572 518 aa26.14■■□□□ 1.78
SRRT-218ENST00000620394 ZMYM6O95789 1325 aa26.14■■□□□ 1.77
SRRT-218ENST00000620394 DNAJC25-GNG10A0A024R161 153 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 OAZ1P54368 228 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 PPIGQ13427 754 aaKnown RBP eCLIP26.13■■□□□ 1.778e-12■■■■□ 19.5
SRRT-218ENST00000620394 MFSD5Q6N075 450 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 MAMDC4Q6UXC1 1216 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 GMCL1Q96IK5 515 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 GLT1D1Q96MS3 346 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.13■■□□□ 1.771e-7■■□□□ 11.9
SRRT-218ENST00000620394 ZHX1Q9UKY1 873 aaPredicted RBP26.13■■□□□ 1.77
SRRT-218ENST00000620394 ELP1O95163 1332 aa26.13■■□□□ 1.77
SRRT-218ENST00000620394 A0A0D9SFI3 127 aa26.12■■□□□ 1.77
SRRT-218ENST00000620394 DUSP11O75319 330 aaKnown RBP26.12■■□□□ 1.77
SRRT-218ENST00000620394 FGRP09769 529 aa26.12■■□□□ 1.77
SRRT-218ENST00000620394 SLFN13Q68D06 897 aa26.12■■□□□ 1.77
SRRT-218ENST00000620394 CCSAPQ6IQ19 270 aaPredicted RBP26.12■■□□□ 1.77
SRRT-218ENST00000620394 LNPKQ9C0E8 428 aa26.12■■□□□ 1.77
SRRT-218ENST00000620394 MCM3APO60318 1980 aa26.12■■□□□ 1.77
SRRT-218ENST00000620394 TNFRSF10AO00220 468 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 ORC4O43929 436 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 ZBED4O75132 1171 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 SNAI1O95863 264 aaPredicted RBP26.11■■□□□ 1.77
SRRT-218ENST00000620394 FDX1P10109 184 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 BMP3P12645 472 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 NOVP48745 357 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 CTDSPL2Q05D32 466 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 KCNA10Q16322 511 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 ZNF467Q7Z7K2 595 aaPredicted RBP26.11■■□□□ 1.77
SRRT-218ENST00000620394 PCSK9Q8NBP7 692 aaKnown RBP26.11■■□□□ 1.77
SRRT-218ENST00000620394 KIFC2Q96AC6 838 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 FAM227BQ96M60 508 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 GAS2L1Q99501 681 aaPredicted RBP26.11■■□□□ 1.77
SRRT-218ENST00000620394 LAMA4Q16363 1823 aa26.11■■□□□ 1.77
SRRT-218ENST00000620394 DDX11Q96FC9 970 aa26.1■■□□□ 1.77
SRRT-218ENST00000620394 IL17RBQ9NRM6 502 aa26.1■■□□□ 1.77
SRRT-218ENST00000620394 MYADML2A6NDP7 307 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 TSPY2A6NKD2 308 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 PLA2G6O60733 806 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 STAT2P52630 851 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 MCMDC2Q4G0Z9 681 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 PSRC1Q6PGN9 363 aaPredicted RBP26.09■■□□□ 1.77
SRRT-218ENST00000620394 CPXCR1Q8N123 301 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
SRRT-218ENST00000620394 SPC25Q9HBM1 224 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 RAVER2Q9HCJ3 691 aaKnown RBP26.09■■□□□ 1.77
SRRT-218ENST00000620394 FBXO40Q9UH90 709 aa26.09■■□□□ 1.77
SRRT-218ENST00000620394 A0A0U1RQG5 324 aaPredicted RBP26.08■■□□□ 1.77
SRRT-218ENST00000620394 C6orf222P0C671 652 aaPredicted RBP26.08■■□□□ 1.77
SRRT-218ENST00000620394 RASIP1Q5U651 963 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 FAM160B2Q86V87 743 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 TMEM199Q8N511 208 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 CHST13Q8NET6 341 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 PBX4Q9BYU1 374 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 OSBPL3Q9H4L5 887 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 INCENPQ9NQS7 918 aa26.08■■□□□ 1.77
SRRT-218ENST00000620394 MUC3AQ02505 3323 aa26.08■■□□□ 1.76
SRRT-218ENST00000620394 TMEM232C9JQI7 657 aa26.07■■□□□ 1.76
SRRT-218ENST00000620394 TMEM240Q5SV17 173 aa26.07■■□□□ 1.76
SRRT-218ENST00000620394 AKNAD1Q5T1N1 836 aa26.07■■□□□ 1.76
SRRT-218ENST00000620394 ZNF589Q86UQ0 364 aaPredicted RBP26.07■■□□□ 1.76
SRRT-218ENST00000620394 UPF3AQ9H1J1 476 aaKnown RBP26.07■■□□□ 1.76
SRRT-218ENST00000620394 STX8Q9UNK0 236 aa26.07■■□□□ 1.76
SRRT-218ENST00000620394 CTDP1Q9Y5B0 961 aaPredicted RBP26.07■■□□□ 1.76
SRRT-218ENST00000620394 LRRC37A2A6NM11 1700 aa26.07■■□□□ 1.76
SRRT-218ENST00000620394 GBF1Q92538 1859 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 NMT2O60551 498 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 FGAP02671 866 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 ASGR1P07306 291 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 SLC1A4P43007 532 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 CDK7P50613 346 aa26.06■■□□□ 1.76
SRRT-218ENST00000620394 NMIQ13287 307 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms