RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 COA7Q96BR5 231 aa17.45■□□□□ 0.38
PSMC3-213ENST00000619920 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
PSMC3-213ENST00000619920 A0A1W2PRG0 241 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 RAD21O60216 631 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 PPP1R11O60927 126 aaPredicted RBP17.44■□□□□ 0.38
PSMC3-213ENST00000619920 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
PSMC3-213ENST00000619920 CCDC34Q96HJ3 373 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 PYM1Q9BRP8 204 aaKnown RBP17.44■□□□□ 0.38
PSMC3-213ENST00000619920 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
PSMC3-213ENST00000619920 DNAJC25Q9H1X3 360 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 SH2D4AQ9H788 454 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 GOPCQ9HD26 462 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 GINM1Q9NU53 330 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 TUBE1Q9UJT0 475 aa17.44■□□□□ 0.38
PSMC3-213ENST00000619920 POLR2DO15514 142 aaKnown RBP17.43■□□□□ 0.38
PSMC3-213ENST00000619920 LMNB1P20700 586 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 LONP1P36776 959 aaKnown RBP17.43■□□□□ 0.38
PSMC3-213ENST00000619920 PRPHP41219 470 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 NEK8Q86SG6 692 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 CUL5Q93034 780 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
PSMC3-213ENST00000619920 VWA3AA6NCI4 1184 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 H7C1D1 291 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 EGFRP00533 1210 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 ASNSP08243 561 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 NLRP12P59046 1061 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
PSMC3-213ENST00000619920 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 SAMD7Q7Z3H4 446 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 CEP57L1Q8IYX8 460 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 SYMPKQ92797 1274 aaKnown RBP17.42■□□□□ 0.38
PSMC3-213ENST00000619920 BIN2Q9UBW5 565 aaPredicted RBP17.42■□□□□ 0.38
PSMC3-213ENST00000619920 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
PSMC3-213ENST00000619920 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 CLK2P49760 499 aaKnown RBP17.41■□□□□ 0.38
PSMC3-213ENST00000619920 CDC37Q16543 378 aaPredicted RBP17.41■□□□□ 0.38
PSMC3-213ENST00000619920 IL17AQ16552 155 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 JAKMIP3Q5VZ66 844 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 TRIM44Q96DX7 344 aaPredicted RBP17.41■□□□□ 0.38
PSMC3-213ENST00000619920 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 BPIFA3Q9BQP9 254 aa17.41■□□□□ 0.38
PSMC3-213ENST00000619920 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
PSMC3-213ENST00000619920 ECE1P42892 770 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 TRAF1Q13077 416 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 IQCB1Q15051 598 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
PSMC3-213ENST00000619920 HS1BP3Q53T59 392 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
PSMC3-213ENST00000619920 LUZP1Q86V48 1076 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 GPC2Q8N158 579 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
PSMC3-213ENST00000619920 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
PSMC3-213ENST00000619920 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 SERTAD1Q9UHV2 236 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 HACL1Q9UJ83 578 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 PCDHA1Q9Y5I3 950 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 PLA2G6O60733 806 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 SLFN14P0C7P3 912 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 POSTNQ15063 836 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 HOOK2Q96ED9 719 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
PSMC3-213ENST00000619920 CCNT1O60563 726 aaKnown RBP17.39■□□□□ 0.37
PSMC3-213ENST00000619920 ADCY5O95622 1261 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
PSMC3-213ENST00000619920 PNOCQ13519 176 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 LETM2Q2VYF4 491 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 APOBEC3FQ8IUX4 373 aaKnown RBP17.39■□□□□ 0.37
PSMC3-213ENST00000619920 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
PSMC3-213ENST00000619920 DEFB129Q9H1M3 183 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
PSMC3-213ENST00000619920 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 NEMFO60524 1076 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 OR52Z1P0C646 297 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 TXLNAP40222 546 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 STAT2P52630 851 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 PDILTQ8N807 584 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 AK8Q96MA6 479 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 NAP1L4Q99733 375 aaKnown RBP17.38■□□□□ 0.37
PSMC3-213ENST00000619920 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
PSMC3-213ENST00000619920 A0A087X0B3 334 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms