RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZSCAN29Q8IWY8 852 aaPredicted RBP21.91■■□□□ 1.1
LAPTM4B-204ENST00000619747 RASSF4Q9H2L5 321 aa21.91■■□□□ 1.1
LAPTM4B-204ENST00000619747 CRKP46108 304 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 MORC3Q14149 939 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 KARSQ15046 597 aaKnown RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 EZH2Q15910 746 aaKnown RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 RASSF8Q8NHQ8 419 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 COA7Q96BR5 231 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 SAMSN1Q9NSI8 373 aaKnown RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 ZNF446Q9NWS9 450 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 BIN2Q9UBW5 565 aaPredicted RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 SEC63Q9UGP8 760 aaKnown RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 MYCNP04198 464 aaPredicted RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 LETM2Q2VYF4 491 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 JAKMIP3Q5VZ66 844 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 KANK3Q6NY19 840 aa21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 RRP36Q96EU6 259 aaKnown RBP21.9■■□□□ 1.1
LAPTM4B-204ENST00000619747 TRIM66O15016 1216 aa21.89■■□□□ 1.1
LAPTM4B-204ENST00000619747 PDHBP11177 359 aa21.89■■□□□ 1.1
LAPTM4B-204ENST00000619747 AOC3Q16853 763 aa21.89■■□□□ 1.1
LAPTM4B-204ENST00000619747 C10orf67Q8IYJ2 551 aa21.89■■□□□ 1.1
LAPTM4B-204ENST00000619747 FLAD1Q8NFF5 587 aa21.89■■□□□ 1.1
LAPTM4B-204ENST00000619747 SLC16A2P36021 539 aa21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 GTF2A1P52655 376 aaPredicted RBP21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 GABPAQ06546 454 aa21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 ARMCX5Q6P1M9 558 aa21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCDC148Q8NFR7 591 aa21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 SH3GLB2Q9NR46 395 aa21.89■■□□□ 1.09
LAPTM4B-204ENST00000619747 CD44P16070 742 aaKnown RBP21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 TRAPPC10P48553 1259 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCZ1BP86790 482 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCZ1P86791 482 aaPredicted RBP21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 TTBK2Q6IQ55 1244 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 C4orf32Q8N8J7 132 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 SRCAPQ6ZRS2 3230 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 M0R2N6 131 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 FAM193AP78312 1265 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 NT5DC1Q5TFE4 455 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 SYT10Q6XYQ8 523 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 MAPK8IP1Q9UQF2 711 aa21.88■■□□□ 1.09
LAPTM4B-204ENST00000619747 ECE2O60344 883 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 MTRQ99707 1265 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 SPZ1Q9BXG8 430 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 SHMT1P34896 483 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 CUL4BQ13620 913 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 CEP135Q66GS9 1140 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 KCTD1Q719H9 257 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 MLKLQ8NB16 471 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 ADAMTSL1Q8N6G6 1762 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCNT1O60563 726 aaKnown RBP21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 PODNQ7Z5L7 613 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 CREBRFQ8IUR6 639 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 IQUBQ8NA54 791 aa21.87■■□□□ 1.09
LAPTM4B-204ENST00000619747 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 SOGA3Q5TF21 947 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 DTHD1Q6ZMT9 781 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 DDTLA6NHG4 134 aaPredicted RBP21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 DPYDQ12882 1025 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCDC34Q96HJ3 373 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 LZTS2Q9BRK4 669 aa21.86■■□□□ 1.09
LAPTM4B-204ENST00000619747 SFPQP23246 707 aaKnown RBP eCLIP21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 SPATA20Q8TB22 786 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 UIMC1Q96RL1 719 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 ZMYND12Q9H0C1 365 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 LCMT1Q9UIC8 334 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 SUGT1Q9Y2Z0 365 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 C21orf2O43822 256 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 E2F4Q16254 413 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 SH3RF1Q7Z6J0 888 aa21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 ELOA2Q8IYF1 753 aaPredicted RBP21.85■■□□□ 1.09
LAPTM4B-204ENST00000619747 LRRC37AA6NMS7 1700 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 CCDC96Q2M329 555 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 HHIPL2Q6UWX4 724 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 C6orf50Q9HD87 102 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 INTS13Q9NVM9 706 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 TTLL1O95922 423 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 HLA-DOAP06340 250 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 DNAJC18Q9H819 358 aa21.84■■□□□ 1.09
LAPTM4B-204ENST00000619747 STAT6P42226 847 aa21.83■■□□□ 1.09
LAPTM4B-204ENST00000619747 TBCKQ8TEA7 893 aa21.83■■□□□ 1.09
LAPTM4B-204ENST00000619747 POLR3GO15318 223 aaPredicted RBP21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 UBA7P41226 1012 aa21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 GSDMDP57764 484 aa21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 SLC15A2Q16348 729 aa21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 PDXDC2PQ6P474 469 aa21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 TDRD3Q9H7E2 651 aaKnown RBP21.83■■□□□ 1.08
LAPTM4B-204ENST00000619747 NT5C2P49902 561 aa21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 DHX8Q14562 1220 aaKnown RBP21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 DACT2Q5SW24 774 aa21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 DACH1Q9UI36 760 aa21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 SLX4Q8IY92 1834 aa21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 MYO1CO00159 1063 aa21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 BMS1Q14692 1282 aaKnown RBP21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 NONOQ15233 471 aaKnown RBP eCLIP21.82■■□□□ 1.087e-7■■■■□ 26.1
LAPTM4B-204ENST00000619747 ARL6IP4Q66PJ3 421 aaKnown RBP21.82■■□□□ 1.08
LAPTM4B-204ENST00000619747 ENOX1Q8TC92 643 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms