RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
TARDBP-221ENST00000619555 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 NMT2O60551 498 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 PQBP1O60828 265 aaKnown RBP13.24□□□□□ -0.29
TARDBP-221ENST00000619555 ACLYP53396 1101 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 OAZ1P54368 228 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 SNAP25P60880 206 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 AAMPQ13685 434 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
TARDBP-221ENST00000619555 RASGRP2Q7LDG7 609 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-221ENST00000619555 KLHDC9Q8NEP7 349 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 AGBL1Q96MI9 1066 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
TARDBP-221ENST00000619555 IL17RBQ9NRM6 502 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-221ENST00000619555 FBXO40Q9UH90 709 aa13.24□□□□□ -0.29
TARDBP-221ENST00000619555 ZNF536O15090 1300 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 TSPY2A6NKD2 308 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 ADCY6O43306 1168 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
TARDBP-221ENST00000619555 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
TARDBP-221ENST00000619555 CLTBP09497 229 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 SLC1A4P43007 532 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 STAT2P52630 851 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 PDE1AP54750 535 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 CNTN2Q02246 1040 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 IKQ13123 557 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-221ENST00000619555 KCNA10Q16322 511 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 FAM109BQ6ICB4 259 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-221ENST00000619555 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-221ENST00000619555 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 EVI5LQ96CN4 794 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
TARDBP-221ENST00000619555 DLL1O00548 723 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 FDX1P10109 184 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 EPHB4P54760 987 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 GUCD1Q96NT3 240 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 KATNBL1Q9H079 304 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 ABHD16BQ9H3Z7 469 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 ANAPC4Q9UJX5 808 aa13.22□□□□□ -0.29
TARDBP-221ENST00000619555 A0A0D9SFI3 127 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 SOWAHBA6NEL2 793 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 PLA2G6O60733 806 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-221ENST00000619555 ALAS1P13196 640 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 FAAP100Q0VG06 881 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 ALX1Q15699 326 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 A1CFQ9NQ94 594 aaKnown RBP13.21□□□□□ -0.29
TARDBP-221ENST00000619555 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.29
TARDBP-221ENST00000619555 DDX49Q9Y6V7 483 aaKnown RBP13.21□□□□□ -0.29
TARDBP-221ENST00000619555 MYO9BQ13459 2157 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 ORC4O43929 436 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 FGAP02671 866 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 ASGR1P07306 291 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 FGRP09769 529 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 RAG1P15918 1043 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 NOVP48745 357 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 GJA9P57773 515 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 UPF3AQ9H1J1 476 aaKnown RBP13.2□□□□□ -0.3
TARDBP-221ENST00000619555 TOMM22Q9NS69 142 aa13.2□□□□□ -0.3
TARDBP-221ENST00000619555 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 CTAGE5O15320 804 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 PTGS1P23219 599 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 BEX3Q00994 111 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms