RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 MINPP1Q9UNW1 487 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 PXDNQ92626 1479 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 GOLGA6CA6NDK9 693 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 FOXN1O15353 648 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 MYL1P05976 194 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 GOLGA6DP0CG33 693 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 PRDX5P30044 214 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 FAM26FQ5R3K3 315 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 IGDCC4Q8TDY8 1250 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 FUCA2Q9BTY2 467 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 GOLGA6AQ9NYA3 693 aa15.42■□□□□ 0.06
CNOT3-210ENST00000618939 MYO5BQ9ULV0 1848 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 GNA14O95837 355 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 GUCY1A2P33402 732 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 SRP68Q9UHB9 627 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 CYP2D6P10635 497 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 KRT31Q15323 416 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 LSM14BQ9BX40 385 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 ARHGEF10LQ9HCE6 1279 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 STK24Q9Y6E0 443 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 SLIT1O75093 1534 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 METTL16Q86W50 562 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 TBCKQ8TEA7 893 aa15.41■□□□□ 0.06
CNOT3-210ENST00000618939 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.065e-7■■■■■ 70.1
CNOT3-210ENST00000618939 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 DDX25Q9UHL0 483 aaKnown RBP15.41■□□□□ 0.06
CNOT3-210ENST00000618939 ATP8B1O43520 1251 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 MFAP3LO75121 409 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 DESP17661 470 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 DMTNQ08495 405 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 C10orf67Q8IYJ2 551 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
CNOT3-210ENST00000618939 FLOT1O75955 427 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 GCNT3O95395 438 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 ST3GAL1Q11201 340 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 ENGASEQ8NFI3 743 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 ENC1O14682 589 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 CTNNA2P26232 953 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 CCDC26Q8TAB7 109 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 CELF1Q92879 486 aaKnown RBP15.4■□□□□ 0.06
CNOT3-210ENST00000618939 MRPL44Q9H9J2 332 aaKnown RBP15.4■□□□□ 0.06
CNOT3-210ENST00000618939 DISC1Q9NRI5 854 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.4■□□□□ 0.06
CNOT3-210ENST00000618939 CEP104O60308 925 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 TNFAIP3P21580 790 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 LONRF2Q1L5Z9 754 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 DHX37Q8IY37 1157 aaKnown RBP15.4■□□□□ 0.06
CNOT3-210ENST00000618939 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 HYOU1Q9Y4L1 999 aa15.4■□□□□ 0.06
CNOT3-210ENST00000618939 SCNN1DP51172 638 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CCZ1BP86790 482 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-210ENST00000618939 RPS6KA1Q15418 735 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 PIGSQ96S52 555 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-210ENST00000618939 PANK4Q9NVE7 773 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 ANKRD26Q9UPS8 1709 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 ARHGEF35A5YM69 484 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CFBP00751 764 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 TCP1P17987 556 aaKnown RBP15.39■□□□□ 0.05
CNOT3-210ENST00000618939 PFKFB3Q16875 520 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-210ENST00000618939 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
CNOT3-210ENST00000618939 ANKRD62A6NC57 917 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CCNE1P24864 410 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 PAK2Q13177 524 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CUL4BQ13620 913 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 HPS5Q9UPZ3 1129 aa15.39■□□□□ 0.05
CNOT3-210ENST00000618939 CCDC151A5D8V7 595 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 NMT2O60551 498 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 PLCG1P19174 1290 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 TCP11X2Q5H9J9 407 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 KLHL7Q8IXQ5 586 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 DPF2Q92785 391 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.38■□□□□ 0.05
CNOT3-210ENST00000618939 NT5C2P49902 561 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 KMT5BQ4FZB7 885 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 PRR16Q569H4 304 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 ARMCX3Q9UH62 379 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-210ENST00000618939 FBXO2Q9UK22 296 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-210ENST00000618939 COL15A1P39059 1388 aa15.38■□□□□ 0.05
CNOT3-210ENST00000618939 TLDC2A0PJX2 215 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms