RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 SEC31AO94979 1220 aaKnown RBP12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 DNM2P50570 870 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 LRMPQ12912 555 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 SGK1O00141 431 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 PPIP5K1Q6PFW1 1433 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 POC1B-GALNT4F8VUJ3 575 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 EXOC5O00471 708 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 BFSP1Q12934 665 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 PHKBQ93100 1093 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 GFAPP14136 432 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 GRAMD1BQ3KR37 738 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 RASGRF2O14827 1237 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 GPC4O75487 556 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 ATG16L1Q676U5 607 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 FGD4Q96M96 766 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 EHHADHQ08426 723 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 HADHQ16836 314 aaKnown RBP12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
PCDHA4-204ENST00000618834 KAZNQ674X7 775 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 MAGEA9P43362 315 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 COPS6Q7L5N1 327 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 CPP00450 1065 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 LRWD1Q9UFC0 647 aa12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.4
PCDHA4-204ENST00000618834 FAM170AA1A519 330 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 KIF22Q14807 665 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 ICE2Q659A1 982 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 CAPN11Q9UMQ6 739 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 SYCE1LA8MT33 242 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 PDE1BQ01064 536 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 SAAL1Q96ER3 474 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 ANGPTL3Q9Y5C1 460 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 NPR1P16066 1061 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 ETF1P62495 437 aaKnown RBP12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 DYMQ7RTS9 669 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 CABP7Q86V35 215 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 ANAPC5Q9UJX4 755 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 KDRP35968 1356 aa12.52□□□□□ -0.41
PCDHA4-204ENST00000618834 MAPK13O15264 365 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 NOP14P78316 857 aaKnown RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 FBXL13Q8NEE6 735 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SKOR1P84550 965 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 IQCB1Q15051 598 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PDHA1P08559 390 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 NR1D1P20393 614 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 NLRP3Q96P20 1036 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 RANBP1P43487 201 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 TOM1L1O75674 476 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 DCTN3O75935 186 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PIK3CAP42336 1068 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SUFUQ9UMX1 484 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 A6NJR5 290 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 KDM1AO60341 852 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 PFKFB1P16118 471 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 KPNA2P52292 529 aaKnown RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 DMP1Q13316 513 aaPredicted RBP12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 SLC12A1Q13621 1099 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 ANKRD35Q8N283 1001 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 CDC23Q9UJX2 597 aa12.51□□□□□ -0.41
PCDHA4-204ENST00000618834 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 NNTQ13423 1086 aa12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 GTPBP10A4D1E9 387 aaKnown RBP12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 TMEM232C9JQI7 657 aa12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 MRPL28Q13084 256 aaKnown RBP12.5□□□□□ -0.41
PCDHA4-204ENST00000618834 DIS3L2Q8IYB7 885 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms