RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 LAMA3Q16787 3333 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 SYCE3A1L190 88 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 PATL2C9JE40 543 aaKnown RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 EEF2P13639 858 aaKnown RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 ATP2B2Q01814 1243 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 PRKCZQ05513 592 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 KRT32Q14532 448 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 ANKRD1Q15327 319 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 SBK1Q52WX2 424 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 NOM1Q5C9Z4 860 aaKnown RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 LRSAM1Q6UWE0 723 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 LRRC47Q8N1G4 583 aaKnown RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 SMCR8Q8TEV9 937 aaPredicted RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 PKNOX2Q96KN3 472 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 P2RX7Q99572 595 aaKnown RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 NAPBQ9H115 298 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 RPAP3Q9H6T3 665 aaPredicted RBP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 AS3MTQ9HBK9 375 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 FBXO28Q9NVF7 368 aa6.22□□□□□ -1.41
GTDC1-220ENST00000618778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.22□□□□□ -1.41
GTDC1-220ENST00000618778 PLIN4Q96Q06 1357 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 IGKV6D-41A0A0C4DH26 115 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 SPDYE16A6NNV3 312 aaPredicted RBP6.21□□□□□ -1.41
GTDC1-220ENST00000618778 OSBPP22059 807 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 PTPREP23469 700 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 PSMC4P43686 418 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 HERVK_113P62684 666 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 Q3C1V9 767 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 STOX1Q6ZVD7 989 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 TMEM179Q6ZVK1 233 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 FASTKD5Q7L8L6 764 aaKnown RBP6.21□□□□□ -1.41
GTDC1-220ENST00000618778 CEP95Q96GE4 821 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 PAGR1Q9BTK6 254 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 SLC4A5Q9BY07 1137 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 PORCNQ9H237 461 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 EFCC1Q9HA90 598 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 BTBD7Q9P203 1132 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 SWAP70Q9UH65 585 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 PTPN22Q9Y2R2 807 aa6.21□□□□□ -1.41
GTDC1-220ENST00000618778 RAD21O60216 631 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 FGAP02671 866 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 ERO1AQ96HE7 468 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 C12orf42Q96LP6 360 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 PPP1R9BQ96SB3 815 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 KIAA1683Q9H0B3 1180 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 ZCCHC17Q9NP64 241 aaKnown RBP6.21□□□□□ -1.42
GTDC1-220ENST00000618778 TMOD4Q9NZQ9 345 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 VPS9D1Q9Y2B5 631 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 RANBP2P49792 3224 aaKnown RBP6.21□□□□□ -1.42
GTDC1-220ENST00000618778 ZNF236Q9UL36 1845 aa6.21□□□□□ -1.42
GTDC1-220ENST00000618778 PDE4DIPQ5VU43 2346 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 GNAT2P19087 354 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 IRX3P78415 501 aaPredicted RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 DNM1Q05193 864 aaKnown RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 TRIM32Q13049 653 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 STK3Q13188 491 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 MTFR1Q15390 333 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 LARP1BQ659C4 914 aaKnown RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 FBXO46Q6PJ61 603 aaPredicted RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 USP17L2Q6R6M4 530 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 Q6ZUG5 572 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 TANGO6Q9C0B7 1094 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 CABP5Q9NP86 173 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 RBPJLQ9UBG7 517 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 SLC45A1Q9Y2W3 748 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 ATP6V1DQ9Y5K8 247 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 LRRC37A2A6NM11 1700 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 BAZ2BQ9UIF8 2168 aaKnown RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 MYPNQ86TC9 1320 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 VPS37CA5D8V6 355 aaPredicted RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 ELNP15502 786 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 HOXA7P31268 230 aaPredicted RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 E2F4Q16254 413 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 FAM110CQ1W6H9 321 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 RRP12Q5JTH9 1297 aaKnown RBP6.2□□□□□ -1.42
GTDC1-220ENST00000618778 FAM83BQ5T0W9 1011 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 CATSPERGQ6ZRH7 1159 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 GTF3C6Q969F1 213 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 ATG4CQ96DT6 458 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 LRRC2Q9BYS8 371 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 VCPKMTQ9H867 229 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 MKNK2Q9HBH9 465 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 MTMR7Q9Y216 660 aa6.2□□□□□ -1.42
GTDC1-220ENST00000618778 C19orf81C9J6K1 198 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 E7EWF7 191 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 FIBPO43427 364 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 FMNL1O95466 1100 aaPredicted RBP6.19□□□□□ -1.42
GTDC1-220ENST00000618778 NDUFB10O96000 172 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 PDIA4P13667 645 aaKnown RBP6.19□□□□□ -1.42
GTDC1-220ENST00000618778 UBE2HP62256 183 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 ERVK-24P63145 666 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 TFAP4Q01664 338 aa6.19□□□□□ -1.42
GTDC1-220ENST00000618778 EXOSC10Q01780 885 aaKnown RBP6.19□□□□□ -1.42
GTDC1-220ENST00000618778 CCDC173Q0VFZ6 552 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms