RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 NPLOC4Q8TAT6 608 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 MMP19Q99542 508 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 RAVER2Q9HCJ3 691 aaKnown RBP18.79■□□□□ 0.6
BRCA1-228ENST00000618469 FLRT1Q9NZU1 646 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 FRMPD3Q5JV73 1810 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 LAMA2P24043 3122 aaKnown RBP18.78■□□□□ 0.6
BRCA1-228ENST00000618469 TNKSO95271 1327 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 KCTD2Q14681 263 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 KIAA1211Q6ZU35 1233 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 ABRAQ8N0Z2 381 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 TTC14Q96N46 770 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 UBAC1Q9BSL1 405 aa18.78■□□□□ 0.6
BRCA1-228ENST00000618469 RBM8AQ9Y5S9 174 aaKnown RBP18.78■□□□□ 0.6
BRCA1-228ENST00000618469 ZNFX1Q9P2E3 1918 aaKnown RBP18.78■□□□□ 0.6
BRCA1-228ENST00000618469 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 ATP2A1O14983 1001 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 PDHBP11177 359 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 COL6A1P12109 1028 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
BRCA1-228ENST00000618469 OAZ1P54368 228 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 TRDNQ13061 729 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 CCDC178Q5BJE1 867 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 MFSD14CQ5VZR4 134 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 LHX8Q68G74 356 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 ZSCAN10Q96SZ4 725 aaPredicted RBP18.77■□□□□ 0.6
BRCA1-228ENST00000618469 RIPK3Q9Y572 518 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 EYSQ5T1H1 3165 aa18.77■□□□□ 0.6
BRCA1-228ENST00000618469 POTEB2H3BUK9 544 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 PLA2G6O60733 806 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 COBLO75128 1261 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 PGK2P07205 417 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 FDX1P10109 184 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 CCDC174Q6PII3 467 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 DGKHQ86XP1 1220 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
BRCA1-228ENST00000618469 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 SENP6Q9GZR1 1112 aaPredicted RBP18.76■□□□□ 0.59
BRCA1-228ENST00000618469 KAT14Q9H8E8 782 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 GPCPD1Q9NPB8 672 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 ANO2Q9NQ90 1003 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 HOMER2Q9NSB8 354 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 ZSWIM5Q9P217 1185 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 PRR12Q9ULL5 1215 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
BRCA1-228ENST00000618469 CDC45O75419 566 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 CYP2C19P33261 490 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 SLC16A2P36021 539 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 SNAP25P60880 206 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
BRCA1-228ENST00000618469 PNMA1Q8ND90 353 aa18.75■□□□□ 0.59
BRCA1-228ENST00000618469 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
BRCA1-228ENST00000618469 ZNF543Q08ER8 600 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 SYDE2Q5VT97 1194 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 STOX1Q6ZVD7 989 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 CYB5R4Q7L1T6 521 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 ZNF536O15090 1300 aa18.74■□□□□ 0.59
BRCA1-228ENST00000618469 E7EWF7 191 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 SNHG28P0DPA3 235 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 IFIT1BQ5T764 474 aaKnown RBP18.73■□□□□ 0.59
BRCA1-228ENST00000618469 BTNL9Q6UXG8 535 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
BRCA1-228ENST00000618469 RNF146Q9NTX7 359 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 FBXO40Q9UH90 709 aa18.73■□□□□ 0.59
BRCA1-228ENST00000618469 GOLGA8HP0CJ92 632 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 ALAS1P13196 640 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 TAL1P17542 331 aaPredicted RBP18.72■□□□□ 0.59
BRCA1-228ENST00000618469 CHST13Q8NET6 341 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 ANKS1AQ92625 1134 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 DDX11Q96FC9 970 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 RANBP17Q9H2T7 1088 aaKnown RBP18.72■□□□□ 0.59
BRCA1-228ENST00000618469 ACAD9Q9H845 621 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 PPP4R2Q9NY27 417 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 CCPG1Q9ULG6 757 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 VCANP13611 3396 aa18.72■□□□□ 0.59
BRCA1-228ENST00000618469 CYBAP13498 195 aa18.71■□□□□ 0.59
BRCA1-228ENST00000618469 CNGA1P29973 690 aa18.71■□□□□ 0.59
BRCA1-228ENST00000618469 ZNF792Q3KQV3 632 aa18.71■□□□□ 0.59
BRCA1-228ENST00000618469 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
BRCA1-228ENST00000618469 ZNF697Q5TEC3 545 aa18.71■□□□□ 0.59
BRCA1-228ENST00000618469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
BRCA1-228ENST00000618469 ANKRD35Q8N283 1001 aa18.71■□□□□ 0.59
BRCA1-228ENST00000618469 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
BRCA1-228ENST00000618469 IGHA2P01877 340 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 ICAM1P05362 532 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 SEC23AQ15436 765 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 TRPV1Q8NER1 839 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 PRUNE2Q8WUY3 3088 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 CPVLQ9H3G5 476 aa18.7■□□□□ 0.58
BRCA1-228ENST00000618469 DIS3Q9Y2L1 958 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms