RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 SYNE3Q6ZMZ3 975 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 PRR23CQ6ZRP0 262 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 TTLL7Q6ZT98 887 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 ZNF438Q7Z4V0 828 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 RNF168Q8IYW5 571 aaPredicted RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 AGGF1Q8N302 714 aaeCLIP3.98□□□□□ -1.77
SMC5-204ENST00000618375 SMYD1Q8NB12 490 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 CCDC150Q8NCX0 1101 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 OR13H1Q8NG92 308 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 FAM71BQ8TC56 605 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 FOXD4L4Q8WXT5 416 aaPredicted RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 PBXIP1Q96AQ6 731 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 PPP1R14BQ96C90 147 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 MRFAP1L1Q96HT8 127 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 FAM81BQ96LP2 452 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 SCLT1Q96NL6 688 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 JPH2Q9BR39 696 aaPredicted RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 PAGR1Q9BTK6 254 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 TRAIPQ9BWF2 469 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 KIF9Q9HAQ2 790 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 LUC7LQ9NQ29 371 aaKnown RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 TUBA8Q9NY65 449 aaPredicted RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 ORC3Q9UBD5 711 aaPredicted RBP3.98□□□□□ -1.77
SMC5-204ENST00000618375 SERPINA10Q9UK55 444 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 EXOC6BQ9Y2D4 811 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 FAN1Q9Y2M0 1017 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 SNAPC4Q5SXM2 1469 aa3.98□□□□□ -1.77
SMC5-204ENST00000618375 TTC41PQ6P2S7 1318 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 PHLPP2Q6ZVD8 1323 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 BICDL2A1A5D9 508 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 EFCAB8A8MWE9 144 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 F8W735 103 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 ABLIM1O14639 778 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 MAP2K7O14733 419 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 SHOX2O60902 331 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 TADA3O75528 432 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 IGHDP01880 384 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 IDO1P14902 403 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CYP11B2P19099 503 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CASTP20810 708 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 EIF4BP23588 611 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 HOXA10P31260 410 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CD68P34810 354 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CABP4P57796 275 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 DNM1Q05193 864 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 IFFO1Q0D2I5 559 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 FAM69CQ0P6D2 419 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 DYNC1I2Q13409 638 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 DRP2Q13474 957 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CUL3Q13618 768 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 BRD3Q15059 726 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 PTPN14Q15678 1187 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 TPD52L1Q16890 204 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CCDC57Q2TAC2 916 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 ARHGAP29Q52LW3 1261 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 PLEKHO1Q53GL0 409 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 NUGGCQ68CJ6 796 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CC2D1AQ6P1N0 951 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 ACAD11Q709F0 780 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 YTHDF3Q7Z739 585 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 LRRC49Q8IUZ0 686 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 TRMT2AQ8IZ69 625 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 TMEM130Q8N3G9 435 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 HNRNPLLQ8WVV9 542 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CLP1Q92989 425 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 NUDT16Q96DE0 195 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 RSRC1Q96IZ7 334 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 DHRS1Q96LJ7 313 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CCDC114Q96M63 670 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 FUCA2Q9BTY2 467 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 SSBP4Q9BWG4 385 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 MAK16Q9BXY0 300 aaKnown RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CEP41Q9BYV8 373 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 TSGA10Q9BZW7 698 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 TRIM4Q9C037 500 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 NACA2Q9H009 215 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 NRDE2Q9H7Z3 1164 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 ARFGAP3Q9NP61 516 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 PCMTD2Q9NV79 361 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 IFT57Q9NWB7 429 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 KANSL3Q9P2N6 904 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 STOML1Q9UBI4 398 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CORO1CQ9ULV4 474 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 SUGT1Q9Y2Z0 365 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 CDC42BPAQ5VT25 1732 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 POLR3AO14802 1390 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 DENND4BO75064 1496 aaPredicted RBP3.97□□□□□ -1.77
SMC5-204ENST00000618375 CCDC141Q6ZP82 1450 aa3.97□□□□□ -1.77
SMC5-204ENST00000618375 ARHGEF12Q9NZN5 1544 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 CCDC151A5D8V7 595 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 A6NNZ2 444 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 TMEM232C9JQI7 657 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 TNFRSF10BO14763 440 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 DHX15O43143 795 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 SART1O43290 800 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 HYAL3O43820 417 aaPredicted RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 CEP104O60308 925 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms