RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 TBC1D10CQ8IV04 446 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 RNF146Q9NTX7 359 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 BRCA2P51587 3418 aa13.75□□□□□ -0.21
SHANK2-221ENST00000618363 RAD50Q92878 1312 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 KDM4AO75164 1064 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 AKR1A1P14550 325 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-221ENST00000618363 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-221ENST00000618363 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-221ENST00000618363 RNF180Q86T96 592 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 DGKHQ86XP1 1220 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 ZHX1Q9UKY1 873 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-221ENST00000618363 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 TACC3Q9Y6A5 838 aa13.74□□□□□ -0.21
SHANK2-221ENST00000618363 PFASO15067 1338 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 FRMPD2Q68DX3 1309 aaPredicted RBP13.73□□□□□ -0.21
SHANK2-221ENST00000618363 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 MKI67P46013 3256 aaKnown RBP13.73□□□□□ -0.21
SHANK2-221ENST00000618363 IGHA2P01877 340 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 COL6A1P12109 1028 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 NOVP48745 357 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
SHANK2-221ENST00000618363 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
SHANK2-221ENST00000618363 CEP290O15078 2479 aa13.73□□□□□ -0.21
SHANK2-221ENST00000618363 PLXNA1Q9UIW2 1896 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 NEDD4P46934 1319 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 DNAJC25-GNG10A0A024R161 153 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 B4E1Z4 1266 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 SLC34A2O95436 690 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 ICAM1P05362 532 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 GSPT1P15170 499 aaKnown RBP13.72□□□□□ -0.21
SHANK2-221ENST00000618363 SLC16A2P36021 539 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-221ENST00000618363 SNAP25P60880 206 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 MAMDC4Q6UXC1 1216 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 KIAA1211Q6ZU35 1233 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHANK2-221ENST00000618363 ZSCAN10Q96SZ4 725 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-221ENST00000618363 ABHD16BQ9H3Z7 469 aa13.72□□□□□ -0.21
SHANK2-221ENST00000618363 ERICH2A1L162 156 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 ASB14A6NK59 587 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 PDHBP11177 359 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 CHMLP26374 656 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 BTNL9Q6UXG8 535 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
SHANK2-221ENST00000618363 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
SHANK2-221ENST00000618363 LBHD1Q9BQE6 289 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-221ENST00000618363 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.21
SHANK2-221ENST00000618363 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-221ENST00000618363 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
SHANK2-221ENST00000618363 ZNF536O15090 1300 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 SYN1P17600 705 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ZNF543Q08ER8 600 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 LRRC41Q15345 812 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 LRRC26Q2I0M4 334 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ARMCX2Q7L311 632 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 A1CFQ9NQ94 594 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ZSWIM5Q9P217 1185 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
SHANK2-221ENST00000618363 ATP11BQ9Y2G3 1177 aa13.7□□□□□ -0.22
SHANK2-221ENST00000618363 TNKSO95271 1327 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 B4DLN1 442 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 SNAI1O95863 264 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-221ENST00000618363 PGK1P00558 417 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
SHANK2-221ENST00000618363 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 SART3Q15020 963 aaKnown RBP13.69□□□□□ -0.22
SHANK2-221ENST00000618363 ASPRV1Q53RT3 343 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-221ENST00000618363 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 FRMPD3Q5JV73 1810 aa13.69□□□□□ -0.22
SHANK2-221ENST00000618363 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms