RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TESPA1A2RU30 521 aaPredicted RBP15.49■□□□□ 0.07
CIITA-213ENST00000618327 ANKRD62A6NC57 917 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 PUF60Q9UHX1 559 aaKnown RBP15.49■□□□□ 0.07
CIITA-213ENST00000618327 PCDHB6Q9Y5E3 794 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 NOP56O00567 594 aaKnown RBP15.49■□□□□ 0.07
CIITA-213ENST00000618327 GTPBP6O43824 516 aaPredicted RBP15.49■□□□□ 0.07
CIITA-213ENST00000618327 MAEAQ7L5Y9 396 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 PLA2G4DQ86XP0 818 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 PNMA6FA0A0J9YX94 578 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 USP17L5A8MUK1 530 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 POLR3GO15318 223 aaPredicted RBP15.49■□□□□ 0.07
CIITA-213ENST00000618327 ASNSP08243 561 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 FGFR2P21802 821 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 GADL1Q6ZQY3 521 aa15.49■□□□□ 0.07
CIITA-213ENST00000618327 KLRK1P26718 216 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 KRT83P78385 493 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 KARSQ15046 597 aaKnown RBP15.48■□□□□ 0.07
CIITA-213ENST00000618327 GNPTABQ3T906 1256 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 MIER3Q7Z3K6 550 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 MYCT1Q8N699 235 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 PGBD1Q96JS3 809 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 DNAI1Q9UI46 699 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
CIITA-213ENST00000618327 TMCO5BA8MYB1 307 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 DYNC1I1O14576 645 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 TMEM87AQ8NBN3 555 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
CIITA-213ENST00000618327 PCDHA5Q9Y5H7 936 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 RGL2O15211 777 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 GPBP1Q86WP2 473 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 NEDD1Q8NHV4 660 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 BAG1Q99933 345 aaPredicted RBP15.48■□□□□ 0.07
CIITA-213ENST00000618327 SH3GLB2Q9NR46 395 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 TAF6LQ9Y6J9 622 aa15.48■□□□□ 0.07
CIITA-213ENST00000618327 GCFC2P16383 781 aaKnown RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 CDC37Q16543 378 aaPredicted RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 PFKFB3Q16875 520 aaPredicted RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 DYDC1Q8WWB3 177 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 IMPG2Q9BZV3 1241 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 JADE2Q9NQC1 790 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 CALUO43852 315 aaPredicted RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 SBK1Q52WX2 424 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 STYK1Q6J9G0 422 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 SEPT2Q15019 361 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 MAP9Q49MG5 647 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 NELFCDQ8IXH7 590 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 AK8Q96MA6 479 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 ZDHHC9Q9Y397 364 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
CIITA-213ENST00000618327 IFI16Q16666 785 aaKnown RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 KRT26Q7Z3Y9 468 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 ANKRD35Q8N283 1001 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 CPVLQ9H3G5 476 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 MRPL44Q9H9J2 332 aaKnown RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 TAB2Q9NYJ8 693 aa15.47■□□□□ 0.07
CIITA-213ENST00000618327 SRPRBQ9Y5M8 271 aaKnown RBP15.47■□□□□ 0.07
CIITA-213ENST00000618327 GTF2F1P35269 517 aaKnown RBP eCLIP15.46■□□□□ 0.07
CIITA-213ENST00000618327 TRIM14Q14142 442 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 GCNT3O95395 438 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 KIF5AQ12840 1032 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 GRM4Q14833 912 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 DCAF4Q8WV16 495 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 AZI2Q9H6S1 392 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
CIITA-213ENST00000618327 NCBP1Q09161 790 aaKnown RBP15.46■□□□□ 0.06
CIITA-213ENST00000618327 IGDCC4Q8TDY8 1250 aa15.46■□□□□ 0.06
CIITA-213ENST00000618327 SRRTQ9BXP5 876 aaKnown RBP15.46■□□□□ 0.06
CIITA-213ENST00000618327 XPO4Q9C0E2 1151 aaKnown RBP15.46■□□□□ 0.06
CIITA-213ENST00000618327 IMPACTQ9P2X3 320 aa15.46■□□□□ 0.06
CIITA-213ENST00000618327 FLT1P17948 1338 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
CIITA-213ENST00000618327 TUBB4AP04350 444 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 EZRP15311 586 aaKnown RBP15.45■□□□□ 0.06
CIITA-213ENST00000618327 FAM160B2Q86V87 743 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 KRT86O43790 486 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 EXOC7Q9UPT5 735 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 MRVI1Q9Y6F6 885 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 RPN1P04843 607 aaKnown RBP15.45■□□□□ 0.06
CIITA-213ENST00000618327 R3HDM1Q15032 1099 aaKnown RBP15.45■□□□□ 0.06
CIITA-213ENST00000618327 UBE2SQ16763 222 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 ZNF341Q9BYN7 854 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
CIITA-213ENST00000618327 CHD2O14647 1828 aaKnown RBP15.44■□□□□ 0.06
CIITA-213ENST00000618327 DEFB132Q7Z7B7 95 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 GSDMAQ96QA5 445 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 CUEDC2Q9H467 287 aa15.44■□□□□ 0.06
CIITA-213ENST00000618327 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms