RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 UTP6Q9NYH9 597 aaKnown RBP13.67□□□□□ -0.22
SRRT-216ENST00000618262 TMOD4Q9NZQ9 345 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 ZC3H4Q9UPT8 1303 aaKnown RBP13.67□□□□□ -0.22
SRRT-216ENST00000618262 XBP1P17861 261 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 BDNFP23560 247 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 PEX19P40855 299 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 MMTAG2Q9BU76 263 aaKnown RBP13.66□□□□□ -0.22
SRRT-216ENST00000618262 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
SRRT-216ENST00000618262 ZNF646O15015 1829 aaPredicted RBP13.66□□□□□ -0.22
SRRT-216ENST00000618262 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
SRRT-216ENST00000618262 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 RASA1P20936 1047 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 YY1P25490 414 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 SHMT1P34896 483 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 TEPSINQ96N21 525 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
SRRT-216ENST00000618262 TPM1P09493 284 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 SEPT2Q15019 361 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 CERKLQ49MI3 558 aaPredicted RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 MRIQ9BWK5 157 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRRT-216ENST00000618262 TNKSO95271 1327 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 GOLGA8HP0CJ92 632 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 TNNI2P48788 182 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 ALX1Q15699 326 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 MMS22LQ6ZRQ5 1243 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 CEP95Q96GE4 821 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 IL17RBQ9NRM6 502 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 CDKL5O76039 1030 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 SMC2O95347 1197 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 CCDC175P0C221 793 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 MCM6Q14566 821 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 HSP90B2PQ58FF3 399 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 MB21D2Q8IYB1 491 aaPredicted RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 UHMK1Q8TAS1 419 aaKnown RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 ESR2Q92731 530 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
SRRT-216ENST00000618262 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
SRRT-216ENST00000618262 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
SRRT-216ENST00000618262 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 TACO1Q9BSH4 297 aaKnown RBP13.64□□□□□ -0.23
SRRT-216ENST00000618262 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
SRRT-216ENST00000618262 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 KIF5CO60282 957 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 PSMA5P28066 241 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 ECE1P42892 770 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 SLC7A5Q01650 507 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 TNFAIP1Q13829 316 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 TEX35Q5T0J7 233 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 HHATQ5VTY9 493 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 NRBP1Q9UHY1 535 aa13.64□□□□□ -0.23
SRRT-216ENST00000618262 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 APLP1P51693 650 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 ZNF445P59923 1031 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
SRRT-216ENST00000618262 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 ENAHQ8N8S7 591 aaPredicted RBP13.63□□□□□ -0.23
SRRT-216ENST00000618262 AGAP3Q96P47 875 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 ST18O60284 1047 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 ENTPD3O75355 529 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
SRRT-216ENST00000618262 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 GIMAP6Q6P9H5 292 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 CDCA5Q96FF9 252 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
SRRT-216ENST00000618262 TRAIPQ9BWF2 469 aa13.63□□□□□ -0.23
SRRT-216ENST00000618262 DICER1Q9UPY3 1922 aaKnown RBP13.63□□□□□ -0.23
SRRT-216ENST00000618262 RPS6KA3P51812 740 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 HTRA3P83110 453 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 KRT32Q14532 448 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 TSNAXIP1Q2TAA8 658 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ZNF394Q53GI3 561 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 MIEF2Q96C03 454 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 CRACR2AQ9BSW2 395 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 KLHL42Q9P2K6 505 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 TRIM75PA6NK02 468 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms