RNA–Protein interactions for RNA: ENST00000617094.1

PCDHGC4-203, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC4, Length 2,793 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-203ENST00000617094 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
PCDHGC4-203ENST00000617094 LMNB1P20700 586 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PTPREP23469 700 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CAP2P40123 477 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 LUZP1Q86V48 1076 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 GJA10Q969M2 543 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 MYH7BA7E2Y1 1941 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CALML3P27482 149 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CASP1P29466 404 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PNOCQ13519 176 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 FBXO28Q9NVF7 368 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 KCNH3Q9ULD8 1083 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 HPSEQ9Y251 543 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 AP5Z1O43299 807 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CUTAO60888 179 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
PCDHGC4-203ENST00000617094 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 ZBTB5O15062 677 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 CCDC192P0DO97 292 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 STAMQ92783 540 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 DPF2Q92785 391 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 SRPRBQ9Y5M8 271 aaKnown RBP13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 EDIL3O43854 480 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 LETM1O95202 739 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 BMP3P12645 472 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 FKBP1CQ5VVH2 108 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 SYMPKQ92797 1274 aaKnown RBP13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
PCDHGC4-203ENST00000617094 H7C1D1 291 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 SASS6Q6UVJ0 657 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 PLIN2Q99541 437 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 TNNI2P48788 182 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 ADCY7P51828 1080 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 CCDC174Q6PII3 467 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 REXO1Q8N1G1 1221 aaKnown RBP13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
PCDHGC4-203ENST00000617094 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 DHX58Q96C10 678 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 TDP2O95551 362 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 GPC2Q8N158 579 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 MTMR8Q96EF0 704 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
PCDHGC4-203ENST00000617094 TBC1D12O60347 775 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 POTEDQ86YR6 584 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 FEZ1Q99689 392 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 SLC37A4O43826 429 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 GNA11P29992 359 aa13.16□□□□□ -0.3
PCDHGC4-203ENST00000617094 NONOQ15233 471 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms