RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
UBXN1-218ENST00000616865 CDX2Q99626 313 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-218ENST00000616865 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBXN1-218ENST00000616865 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
UBXN1-218ENST00000616865 VCANP13611 3396 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-218ENST00000616865 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 ADAMTS4O75173 837 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 SEC24BO95487 1268 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 CTDSPL2Q05D32 466 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 PDE4BQ07343 736 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-218ENST00000616865 USP26Q9BXU7 913 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 BACH2Q9BYV9 841 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
UBXN1-218ENST00000616865 ITGB8P26012 769 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 RNF41Q9H4P4 317 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-218ENST00000616865 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
UBXN1-218ENST00000616865 SLC27A2O14975 620 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
UBXN1-218ENST00000616865 RASA1P20936 1047 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
UBXN1-218ENST00000616865 MFSD6Q6ZSS7 791 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 MSL3Q8N5Y2 521 aaKnown RBP17.45■□□□□ 0.38
UBXN1-218ENST00000616865 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-218ENST00000616865 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-218ENST00000616865 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 SYNGAP1Q96PV0 1343 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
UBXN1-218ENST00000616865 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 EPHB4P54760 987 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 TRDNQ13061 729 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 RRP12Q5JTH9 1297 aaKnown RBP17.44■□□□□ 0.38
UBXN1-218ENST00000616865 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 MAFAQ8NHW3 353 aaPredicted RBP17.44■□□□□ 0.38
UBXN1-218ENST00000616865 RNPC3Q96LT9 517 aaKnown RBP17.44■□□□□ 0.38
UBXN1-218ENST00000616865 TSEN34Q9BSV6 310 aaKnown RBP17.44■□□□□ 0.38
UBXN1-218ENST00000616865 NYAP2Q9P242 653 aa17.44■□□□□ 0.38
UBXN1-218ENST00000616865 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 TMEM265A0A087WTH1 108 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 F5H6K3 240 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 CYP21A2P08686 494 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 PCP11498 1178 aaKnown RBP17.43■□□□□ 0.38
UBXN1-218ENST00000616865 RAG1P15918 1043 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 HSPA4P34932 840 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 KLRC3Q07444 240 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 KRT32Q14532 448 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 MAMDC4Q6UXC1 1216 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
UBXN1-218ENST00000616865 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-218ENST00000616865 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
UBXN1-218ENST00000616865 SPTBN5Q9NRC6 3674 aaKnown RBP17.42■□□□□ 0.38
UBXN1-218ENST00000616865 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 ATP2A1O14983 1001 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 SNAI1O95863 264 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-218ENST00000616865 NDUFB10O96000 172 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 ACLYP53396 1101 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 FPGSQ05932 587 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 FAAP100Q0VG06 881 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 ANKRD33Q7Z3H0 272 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 KLHDC9Q8NEP7 349 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 ZHX1Q9UKY1 873 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-218ENST00000616865 MCM3APO60318 1980 aa17.42■□□□□ 0.38
UBXN1-218ENST00000616865 IGKV6D-41A0A0C4DH26 115 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 E7EWF7 191 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
UBXN1-218ENST00000616865 PRDM1O75626 825 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBXN1-218ENST00000616865 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-218ENST00000616865 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
UBXN1-218ENST00000616865 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 C22orf23Q9BZE7 217 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 KRT23Q9C075 422 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
UBXN1-218ENST00000616865 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
UBXN1-218ENST00000616865 FOSL2P15408 326 aa17.4■□□□□ 0.38
UBXN1-218ENST00000616865 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-218ENST00000616865 CPXCR1Q8N123 301 aa17.4■□□□□ 0.38
UBXN1-218ENST00000616865 ESR2Q92731 530 aa17.4■□□□□ 0.38
UBXN1-218ENST00000616865 MYADML2A6NDP7 307 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms