RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 KIF5BP33176 963 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 EIF4A3P38919 411 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 MDH1P40925 334 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 MYCBPAPQ8TBZ2 947 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 PRCPP42785 496 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 PAIP2Q9BPZ3 127 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 RBM28Q9NW13 759 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 SALL1Q9NSC2 1324 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 PSMD14O00487 310 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 IFIT1BQ5T764 474 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 KCNV2Q8TDN2 545 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 PTGISQ16647 500 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 CCDC25Q86WR0 208 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 SAAL1Q96ER3 474 aa17.32■□□□□ 0.36
SYNRG-223ENST00000616179 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 RBM12Q9NTZ6 932 aaKnown RBP17.32■□□□□ 0.36
SYNRG-223ENST00000616179 ZKSCAN8Q15776 578 aaPredicted RBP17.31■□□□□ 0.36
SYNRG-223ENST00000616179 CYFIP2Q96F07 1278 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 PCDHA13Q9Y5I0 950 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 TTMPQ5BVD1 217 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 FNBP4Q8N3X1 1017 aaPredicted RBP17.31■□□□□ 0.36
SYNRG-223ENST00000616179 LRRC45Q96CN5 670 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 AGPSO00116 658 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 ACTN4O43707 911 aaKnown RBP17.31■□□□□ 0.36
SYNRG-223ENST00000616179 BMP15O95972 392 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 SCARF1Q14162 830 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 SNX12Q9UMY4 172 aa17.31■□□□□ 0.36
SYNRG-223ENST00000616179 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 PLEKP08567 350 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 CALR3Q96L12 384 aaKnown RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 ATP6V1G3Q96LB4 118 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 NUP58Q9BVL2 599 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 MMP14P50281 582 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 SMTNP53814 917 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 KCNK9Q9NPC2 374 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 OPLAHO14841 1288 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 GSCP56915 257 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-223ENST00000616179 IP6K1Q92551 441 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
SYNRG-223ENST00000616179 RAD21O60216 631 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 HERVK_113P62684 666 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 CCDC197Q8NCU1 140 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 NSMCE1Q8WV22 266 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 FOXP1Q9H334 677 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 VCPKMTQ9H867 229 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 GTPBP6O43824 516 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 KRT18P05783 430 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 KIF11P52732 1056 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 MAGOHP61326 146 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 MAGOHBQ96A72 148 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
SYNRG-223ENST00000616179 LACTBP83111 547 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 ELAC2Q9BQ52 826 aaKnown RBP17.29■□□□□ 0.36
SYNRG-223ENST00000616179 SMIM24O75264 130 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 CAPRIN2Q6IMN6 1127 aaKnown RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 SGSM3Q96HU1 749 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 CAPN6Q9Y6Q1 641 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 FAM153BP0C7A2 387 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 KRT13P13646 458 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 FAM153CQ494X1 144 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 DYMQ7RTS9 669 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 SPAG5Q96R06 1193 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 FAM153AQ9UHL3 310 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 TPX2Q9ULW0 747 aaKnown RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 DIAPH2O60879 1101 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 CEBPAP49715 358 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 UBE4AQ14139 1066 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 DDX42Q86XP3 938 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 RNF41Q9H4P4 317 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-223ENST00000616179 ATP8A1Q9Y2Q0 1164 aa17.28■□□□□ 0.36
SYNRG-223ENST00000616179 L3MBTL1Q9Y468 752 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms