RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TTC26A0AVF1 554 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 PRR29P0C7W0 189 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 PNMA6AP0CW24 399 aaPredicted RBP6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 GPATCH4Q5T3I0 446 aaKnown RBP6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 TMED8Q6PL24 325 aaPredicted RBP6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 SRGAP1Q7Z6B7 1085 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 ZNF710Q8N1W2 664 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 TC2NQ8N9U0 490 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 TEKT1Q969V4 418 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 TSPYL1Q9H0U9 437 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 EPC1Q9H2F5 836 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 ZCCHC17Q9NP64 241 aaKnown RBP6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 GOLGA6L10A6NI86 522 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 ZBED6P86452 979 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 BRD3Q15059 726 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 SLC9C1Q4G0N8 1177 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 TBC1D9BQ66K14 1250 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 STAG2Q8N3U4 1231 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 ENC1O14682 589 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 CUL4BQ13620 913 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 COA7Q96BR5 231 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 CUEDC2Q9H467 287 aa6.28□□□□□ -1.4
SYNCRIP-204ENST00000616122 RPL13P26373 211 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 CALRP27797 417 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PRPF4BQ13523 1007 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 MYOCDQ8IZQ8 938 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 LARP4BQ92615 738 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 P2RX5Q93086 422 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 DHTKD1Q96HY7 919 aaPredicted RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PSTPIP2Q9H939 334 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PHLPP2Q6ZVD8 1323 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TADA3O75528 432 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 MYL1P05976 194 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PLCG1P19174 1290 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 CDK8P49336 464 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 HDXQ7Z353 690 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PANX2Q96RD6 677 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PARD6BQ9BYG5 372 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 ARMCX3Q9UH62 379 aaPredicted RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 SAMM50Q9Y512 469 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 NDUFA10O95299 355 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 HAUS3Q68CZ6 603 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TYW1BQ6NUM6 668 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 SECISBP2LQ93073 1101 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 JAKMIP2Q96AA8 810 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TRIM9Q9C026 710 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 CCSER1Q9C0I3 900 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 NT5C3AQ9H0P0 336 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TBC1D7Q9P0N9 293 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 A0A1B0GTH6 734 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 BMP6P22004 513 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 CYP4A11Q02928 519 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TXNRD1Q16881 649 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZNF658Q5TYW1 1059 aaPredicted RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RBM17Q96I25 401 aaKnown RBP6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RPGRIP1Q96KN7 1286 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 PHF20Q9BVI0 1012 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 TRIM49BA6NDI0 452 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 B4DLN1 442 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 LAD1O00515 517 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 STK4Q13043 487 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RAD9BQ6WBX8 426 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 ADGRA1Q86SQ6 560 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RETREG2Q8NC44 543 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 VPS18Q9P253 973 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 MYO1AQ9UBC5 1043 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 SIGLEC1Q9BZZ2 1709 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RIMBP3CA6NJZ7 1639 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RIMBP3BA6NNM3 1639 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 RIMBP3Q9UFD9 1639 aa6.27□□□□□ -1.41
SYNCRIP-204ENST00000616122 KLRK1P26718 216 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 KLHL30Q0D2K2 578 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 WHAMMP3Q1A5X7 153 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SLFN13Q68D06 897 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 STXBP4Q6ZWJ1 553 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SYCP3Q8IZU3 236 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 CNOT6LQ96LI5 555 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 RWDD2AQ9UIY3 292 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 CFBP00751 764 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SLC16A2P36021 539 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 PRCPP42785 496 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 LRRC41Q15345 812 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 DOK7Q18PE1 504 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 SBK1Q52WX2 424 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TCRBV5S4A2TA0A5A2 114 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 HINFPQ9BQA5 517 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 NBPF3Q9H094 633 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TMEM60Q9H2L4 133 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 MAGEF1Q9HAY2 307 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ACTN4O43707 911 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 VEGFAP15692 232 aaPredicted RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TCP1P17987 556 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 OAS2P29728 719 aaKnown RBP6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 TERF2Q15554 542 aa6.26□□□□□ -1.41
SYNCRIP-204ENST00000616122 ODF2Q5BJF6 829 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms