RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SLC1A4P43007 532 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 VPS53Q5VIR6 699 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 CCSAPQ6IQ19 270 aaPredicted RBP24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 ARMCX2Q7L311 632 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 FAM161BQ96MY7 647 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 GUCD1Q96NT3 240 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 CRBNQ96SW2 442 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 STARD7Q9NQZ5 370 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 IL17RBQ9NRM6 502 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 STX8Q9UNK0 236 aa24.65■■□□□ 1.54
TRAPPC3-208ENST00000616074 ZNF536O15090 1300 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 MOXD2PA6NHM9 499 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 TSPY2A6NKD2 308 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 NMT2O60551 498 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 MCCP23508 829 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 IRX5P78411 483 aaPredicted RBP24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 IKQ13123 557 aaPredicted RBP24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 KCNA10Q16322 511 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 RASGRP2Q7LDG7 609 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 FAM160B2Q86V87 743 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 STAG1Q8WVM7 1258 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 AGBL1Q96MI9 1066 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 ABHD16BQ9H3Z7 469 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 ACAD9Q9H845 621 aa24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.54
TRAPPC3-208ENST00000616074 CDH23Q9H251 3354 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 DLL1O00548 723 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 KIAA0355O15063 1070 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 CCDC144BQ3MJ40 725 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 KCTD1Q719H9 257 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 CCDC144CPQ8IYA2 1237 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 CHURC1Q8WUH1 139 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 NUP133Q8WUM0 1156 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 EVI5LQ96CN4 794 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 EYSQ5T1H1 3165 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 LRRC37A2A6NM11 1700 aa24.63■■□□□ 1.53
TRAPPC3-208ENST00000616074 C6orf222P0C671 652 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 PPP4R3BQ5MIZ7 849 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 ZNF697Q5TEC3 545 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 ANKRD33Q7Z3H0 272 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 KATNBL1Q9H079 304 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 A1CFQ9NQ94 594 aaKnown RBP24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 RNF146Q9NTX7 359 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 ANAPC4Q9UJX5 808 aa24.62■■□□□ 1.53
TRAPPC3-208ENST00000616074 PLA2G6O60733 806 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 RAG1P15918 1043 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 CST5P28325 142 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 PDE1AP54750 535 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 EPHB4P54760 987 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 FAAP100Q0VG06 881 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 FAM133AQ8N9E0 248 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 TOX2Q96NM4 488 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 TMEM39AQ9NV64 488 aa24.61■■□□□ 1.53
TRAPPC3-208ENST00000616074 RANBP6O60518 1105 aaKnown RBP24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 SNAP25P60880 206 aa24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 RCSD1Q6JBY9 416 aa24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 CCDC174Q6PII3 467 aa24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 UPF3AQ9H1J1 476 aaKnown RBP24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 HELLSQ9NRZ9 838 aa24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 LCTP09848 1927 aa24.6■■□□□ 1.53
TRAPPC3-208ENST00000616074 SOWAHBA6NEL2 793 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 DCDC2CA8MYV0 355 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 ASGR1P07306 291 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 ALAS1P13196 640 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 GJA9P57773 515 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 TKFCQ3LXA3 575 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 FAM227BQ96M60 508 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 GLT1D1Q96MS3 346 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 TRERF1Q96PN7 1200 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 SPC25Q9HBM1 224 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 PRR12Q9ULL5 1215 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 MTMR7Q9Y216 660 aa24.59■■□□□ 1.53
TRAPPC3-208ENST00000616074 A0A0D9SFI3 127 aa24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 ORC4O43929 436 aa24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 NOVP48745 357 aa24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 HDAC1Q13547 482 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 ALX1Q15699 326 aa24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 PCSK9Q8NBP7 692 aaKnown RBP24.58■■□□□ 1.53
TRAPPC3-208ENST00000616074 ELP1O95163 1332 aa24.58■■□□□ 1.52
TRAPPC3-208ENST00000616074 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 CTAGE5O15320 804 aa24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 FGRP09769 529 aa24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 SMAD3P84022 425 aaKnown RBP24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 FPGSQ05932 587 aa24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 MUM1L1Q5H9M0 696 aa24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 RNPC3Q96LT9 517 aaKnown RBP24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 ASTN1O14525 1302 aa24.57■■□□□ 1.52
TRAPPC3-208ENST00000616074 CDK7P50613 346 aa24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 GNASQ5JWF2 1037 aa24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 TOMM22Q9NS69 142 aa24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 TBX21Q9UL17 535 aa24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 DDX49Q9Y6V7 483 aaKnown RBP24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 MROH7Q68CQ1 1323 aa24.56■■□□□ 1.52
TRAPPC3-208ENST00000616074 ASB14A6NK59 587 aa24.55■■□□□ 1.52
TRAPPC3-208ENST00000616074 FGAP02671 866 aa24.55■■□□□ 1.52
TRAPPC3-208ENST00000616074 CCDC96Q2M329 555 aa24.55■■□□□ 1.52
TRAPPC3-208ENST00000616074 MCMDC2Q4G0Z9 681 aa24.55■■□□□ 1.52
TRAPPC3-208ENST00000616074 DCAF4Q8WV16 495 aa24.55■■□□□ 1.52
TRAPPC3-208ENST00000616074 SEMA6BQ9H3T3 888 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms