RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PTGS1P23219 599 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 RASA3Q14644 834 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 POSTNQ15063 836 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 QRICH1Q2TAL8 776 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 KIAA1755Q5JYT7 1200 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 SLC30A10Q6XR72 485 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 ARHGAP27Q6ZUM4 889 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 REXO1Q8N1G1 1221 aaKnown RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 EEF2KMTQ96G04 330 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 GMLQ99445 158 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 MYOZ2Q9NPC6 264 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 PCDHA1Q9Y5I3 950 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 DDX60LQ5H9U9 1706 aaKnown RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 LTBP1Q14766 1721 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 ZBTB22O15209 634 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 MYO1BO43795 1136 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 MARCH6O60337 910 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 HOXA13P31271 388 aaPredicted RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 GMPSP49915 693 aaPredicted RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 TGFB2P61812 414 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 UBXN2AP68543 259 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 HDLBPQ00341 1268 aaKnown RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 LRMPQ12912 555 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 NONOQ15233 471 aaKnown RBP eCLIP3.91□□□□□ -1.78
LIG4-205ENST00000614526 ASPRV1Q53RT3 343 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 CCDC174Q6PII3 467 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 CCDC186Q7Z3E2 898 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 ZSCAN30Q86W11 494 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 FCHSD1Q86WN1 690 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 MICALL2Q8IY33 904 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 FAM43AQ8N2R8 423 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 KIFC2Q96AC6 838 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 CCDC17Q96LX7 622 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 ZMYND12Q9H0C1 365 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 RIOX1Q9H6W3 641 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 FBXO28Q9NVF7 368 aa3.91□□□□□ -1.78
LIG4-205ENST00000614526 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.91□□□□□ -1.78
LIG4-205ENST00000614526 LRRC37AA6NMS7 1700 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 NRXN2Q9P2S2 1712 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 GNA11P29992 359 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 ADCY7P51828 1080 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 NLRP12P59046 1061 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 ATP2C1P98194 919 aaPredicted RBP3.9□□□□□ -1.78
LIG4-205ENST00000614526 CDC37Q16543 378 aaPredicted RBP3.9□□□□□ -1.78
LIG4-205ENST00000614526 FAM83BQ5T0W9 1011 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 TATDN1Q6P1N9 297 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 DTHD1Q6ZMT9 781 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 TMEM179Q6ZVK1 233 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 TBC1D5Q92609 795 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 SMARCE1Q969G3 411 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 LZTS2Q9BRK4 669 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 PSTPIP2Q9H939 334 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 CCDC39Q9UFE4 941 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 CNOT7Q9UIV1 285 aaKnown RBP3.9□□□□□ -1.78
LIG4-205ENST00000614526 MAN1B1Q9UKM7 699 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 NAV1Q8NEY1 1877 aa3.9□□□□□ -1.78
LIG4-205ENST00000614526 PCNTO95613 3336 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 PNMA6FA0A0J9YX94 578 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 M0R2N6 131 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 ACTN4O43707 911 aaKnown RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 SLC37A4O43826 429 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 IGSF3O75054 1194 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 ENTPD3O75355 529 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 UBA7P41226 1012 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 ZNF75DP51815 510 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 FKBP1AP62942 108 aaKnown RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 CUL4BQ13620 913 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 CCDC144BQ3MJ40 725 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 C4orf32Q8N8J7 132 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 FAM151AQ8WW52 585 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 PAGE5Q96GU1 130 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 FEZ1Q99689 392 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 MRIQ9BWK5 157 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 NAT10Q9H0A0 1025 aaKnown RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 EHD4Q9H223 541 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 SH3GLB2Q9NR46 395 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 FANCLQ9NW38 375 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 IFNKQ9P0W0 207 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 MYH6P13533 1939 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 MAST2Q6P0Q8 1798 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 POTEMA6NI47 508 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 ZBTB5O15062 677 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 NEMFO60524 1076 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 SNHG28P0DPA3 235 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 BMP3P12645 472 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 STAT6P42226 847 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 MDM2Q00987 491 aaPredicted RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 FMR1Q06787 632 aaKnown RBP eCLIP3.9□□□□□ -1.79
LIG4-205ENST00000614526 GOLGA8FQ08AF8 430 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 GOLGA8DPQ0D2H9 430 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 SPDYE2Q495Y8 402 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 GPATCH4Q5T3I0 446 aaKnown RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 TRMT1LQ7Z2T5 733 aaKnown RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 NEK8Q86SG6 692 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 CPXCR1Q8N123 301 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 CCDC12Q8WUD4 166 aaPredicted RBP3.9□□□□□ -1.79
LIG4-205ENST00000614526 UPF1Q92900 1129 aaKnown RBP eCLIP3.9□□□□□ -1.79
LIG4-205ENST00000614526 FERMT2Q96AC1 680 aa3.9□□□□□ -1.79
LIG4-205ENST00000614526 CNTNAP1P78357 1384 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms