RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PPP2R5BQ15173 497 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 TKFCQ3LXA3 575 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 GPR142Q7Z601 462 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 SOCS4Q8WXH5 440 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 BRPF3Q9ULD4 1205 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
MDC1-209ENST00000613547 A0A0G2JMZ2 1700 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 STRNO43815 780 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 ICAM1P05362 532 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 RXRAP19793 462 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 SMARCA1P28370 1054 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 METAP2P50579 478 aaKnown RBP eCLIP15.41■□□□□ 0.06
MDC1-209ENST00000613547 NEK4P51957 841 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 KCTD2Q14681 263 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 CDC37Q16543 378 aaPredicted RBP15.41■□□□□ 0.06
MDC1-209ENST00000613547 RTN1Q16799 776 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 ALDH8A1Q9H2A2 487 aaPredicted RBP15.41■□□□□ 0.06
MDC1-209ENST00000613547 VAT1LQ9HCJ6 419 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 SRRDQ9UH36 339 aa15.41■□□□□ 0.06
MDC1-209ENST00000613547 FCER1AP12319 257 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 CTGFP29279 349 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 SNAP25P60880 206 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 CHST13Q8NET6 341 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 RRP36Q96EU6 259 aaKnown RBP15.4■□□□□ 0.06
MDC1-209ENST00000613547 NUDT12Q9BQG2 462 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 CPVLQ9H3G5 476 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 JMJD4Q9H9V9 463 aa15.4■□□□□ 0.06
MDC1-209ENST00000613547 SLC15A5A6NIM6 579 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ZBTB5O15062 677 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ALAS1P13196 640 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 PTPREP23469 700 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 EVCP57679 992 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 PRKCZQ05513 592 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
MDC1-209ENST00000613547 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
MDC1-209ENST00000613547 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 FBXO11Q86XK2 927 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 HOMER1Q86YM7 354 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ABRAQ8N0Z2 381 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 RAET1EQ8TD07 263 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
MDC1-209ENST00000613547 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 RIOX1Q9H6W3 641 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ACAD9Q9H845 621 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 HOMER2Q9NSB8 354 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 RNF146Q9NTX7 359 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 SEC63Q9UGP8 760 aaKnown RBP15.39■□□□□ 0.05
MDC1-209ENST00000613547 PTPN22Q9Y2R2 807 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 ZNF536O15090 1300 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 RLFQ13129 1914 aa15.39■□□□□ 0.05
MDC1-209ENST00000613547 RGS2P41220 211 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 FLT3LGP49771 235 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 AK2P54819 239 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 RABEP1Q15276 862 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 QRICH1Q2TAL8 776 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 DDX11Q96FC9 970 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 TBC1D32Q96NH3 1257 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 TRERF1Q96PN7 1200 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 MMP19Q99542 508 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 AMNQ9BXJ7 453 aa15.38■□□□□ 0.05
MDC1-209ENST00000613547 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 ADORA2AP29274 412 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 PDIA3P30101 505 aaKnown RBP15.37■□□□□ 0.05
MDC1-209ENST00000613547 CAP1Q01518 475 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 MAP2K5Q13163 448 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 IRF5Q13568 498 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 GRB14Q14449 540 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 USH1GQ495M9 461 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 CPLX2Q6PUV4 134 aaKnown RBP15.37■□□□□ 0.05
MDC1-209ENST00000613547 ANKRD35Q8N283 1001 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 PIGSQ96S52 555 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 ABCB11O95342 1321 aa15.37■□□□□ 0.05
MDC1-209ENST00000613547 NID2Q14112 1375 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 PARP14Q460N5 1801 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 CPLX1O14810 134 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 MORN1Q5T089 497 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 COL13A1Q5TAT6 717 aaPredicted RBP15.36■□□□□ 0.05
MDC1-209ENST00000613547 NBPF11Q86T75 865 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 DPP9Q86TI2 863 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 TRMT44Q8IYL2 757 aaKnown RBP15.36■□□□□ 0.05
MDC1-209ENST00000613547 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
MDC1-209ENST00000613547 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 APBA2Q99767 749 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 MCOLN1Q9GZU1 580 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 SLKQ9H2G2 1235 aaPredicted RBP15.36■□□□□ 0.05
MDC1-209ENST00000613547 GJD2Q9UKL4 321 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 GABRQQ9UN88 632 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 HPS5Q9UPZ3 1129 aa15.36■□□□□ 0.05
MDC1-209ENST00000613547 MRPL11Q9Y3B7 192 aaKnown RBP15.36■□□□□ 0.05
MDC1-209ENST00000613547 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms