RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CENPUQ71F23 418 aa9.57□□□□□ -0.88
TTC28-208ENST00000612946 MRPL46Q9H2W6 279 aaKnown RBP9.57□□□□□ -0.88
TTC28-208ENST00000612946 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 FAM129AQ9BZQ8 928 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 TMOD2Q9NZR1 351 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 HNRNPRO43390 633 aaKnown RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 ZNF189O75820 626 aaPredicted RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 PSMD6Q15008 389 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 LRRC37BQ96QE4 947 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 BABAM1Q9NWV8 329 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 ZSCAN20P17040 1043 aaPredicted RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 SPATA1Q5VX52 437 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 KIRREL3Q8IZU9 778 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 SMTNP53814 917 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 RPS6KA2Q15349 733 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 HIC2Q96JB3 615 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 OSBPL5Q9H0X9 879 aaPredicted RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 VPS37BQ9H9H4 285 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 TMEM110-MUSTN1A8MSY1 372 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 SERPINB2P05120 415 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 STX17P56962 302 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 CDKL2Q92772 493 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 ADCY3O60266 1144 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 SCG2P13521 617 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 MRPS15P82914 257 aaKnown RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 FSCBQ5H9T9 825 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 ATP6V0A1Q93050 837 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 PPWD1Q96BP3 646 aaKnown RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 CEP85Q6P2H3 762 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 POLR3CQ9BUI4 534 aaPredicted RBP9.56□□□□□ -0.88
TTC28-208ENST00000612946 MGARPQ8TDB4 240 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 NUDCD1Q96RS6 583 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 SENP1Q9P0U3 644 aa9.56□□□□□ -0.88
TTC28-208ENST00000612946 C2CD5Q86YS7 1000 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 CD2APQ9Y5K6 639 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 STARD3NLO95772 234 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MORC3Q14149 939 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 VSTM4Q8IW00 320 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 CFAP74Q9C0B2 1584 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MINDY4BA8MYZ0 360 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 SAMM50Q9Y512 469 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 PPIP5K1Q6PFW1 1433 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 SPARCL1Q14515 664 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 NLRP14Q86W24 1093 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 NUDCD3Q8IVD9 361 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 SLC12A2P55011 1212 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MRPL28Q13084 256 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 MMEL1Q495T6 779 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MRPL50Q8N5N7 158 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 CDK19Q9BWU1 502 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 BLOC1S6Q9UL45 172 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 WDR46O15213 610 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 IL15P40933 162 aaPredicted RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 NLRP2Q9NX02 1062 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 PYCARDQ9ULZ3 195 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 HEXIM1O94992 359 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 KRT10P13645 584 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 DACT3Q96B18 629 aaPredicted RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 EIF3HO15372 352 aaKnown RBP eCLIP9.55□□□□□ -0.886e-7■■■■■ 29.3
TTC28-208ENST00000612946 SGSM2O43147 1006 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 ACTN1P12814 892 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 CEP55Q53EZ4 464 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 ANKRD42Q8N9B4 389 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 AP4S1Q9Y587 144 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 STX3Q13277 289 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
TTC28-208ENST00000612946 SLC17A8Q8NDX2 589 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 MTRQ99707 1265 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 TRAF3IP3Q9Y228 551 aa9.55□□□□□ -0.88
TTC28-208ENST00000612946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.55□□□□□ -0.88
TTC28-208ENST00000612946 DUOX2Q9NRD8 1548 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 TBKBP1A7MCY6 615 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 CABP4P57796 275 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 HSP90AA4PQ58FG1 418 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PALM2Q8IXS6 379 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 RGL1Q9NZL6 768 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 SERPINB1P30740 379 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 BZW1Q7L1Q6 419 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 ZMYND12Q9H0C1 365 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 KCNK3O14649 394 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 GYG2O15488 501 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PPP2R2AP63151 447 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms