RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 CDCP2Q5VXM1 449 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 HHIPL2Q6UWX4 724 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 FAM196AQ6ZSG2 479 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 TMC4Q7Z404 712 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 FBXL21Q9UKT6 434 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 FAN1Q9Y2M0 1017 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 PCDHB12Q9Y5F1 795 aa5.93□□□□□ -1.46
CCDC144B-206ENST00000609959 ZNF205O95201 554 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 ATE1O95260 518 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 IGFBP6P24592 240 aaPredicted RBP5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 ZNF200P98182 395 aaPredicted RBP5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 PLEKHN1Q494U1 663 aaPredicted RBP5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 JAMLQ86YT9 394 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 NAT16Q8N8M0 369 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 MKRN2Q9H000 416 aaKnown RBP5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 PRR13Q9NZ81 148 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 IMPACTQ9P2X3 320 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 SUSD2Q9UGT4 822 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
CCDC144B-206ENST00000609959 MEIS1O00470 390 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 PRICKLE3O43900 615 aaPredicted RBP5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 CTSHP09668 335 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 MSL3P1P0C860 447 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 VAV1P15498 845 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 LIMS1P48059 325 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 PAQR3Q6TCH7 311 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 ANTXR1Q9H6X2 564 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
CCDC144B-206ENST00000609959 TLR3O15455 904 aaKnown RBP5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 SORBS3O60504 671 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 CYBBP04839 570 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 GSNP06396 782 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 FOXO4P98177 505 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 NT5DC1Q5TFE4 455 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 CWF19L1Q69YN2 538 aaKnown RBP5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 NLRC3Q7RTR2 1065 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 LSRQ86X29 649 aaPredicted RBP5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 RGS22Q8NE09 1264 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 FBXO27Q8NI29 283 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 JMJD8Q96S16 334 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 DSCC1Q9BVC3 393 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 LRRC3Q9BY71 257 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 CNNM2Q9H8M5 875 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 AP5S1Q9NUS5 200 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 SUPT16HQ9Y5B9 1047 aaKnown RBP5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 PMF1-BGLAPU3KQ54 211 aa5.9□□□□□ -1.46
CCDC144B-206ENST00000609959 MAGEA10P43363 369 aaPredicted RBP5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 LRRFIP1Q32MZ4 808 aaKnown RBP5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 LIPIQ6XZB0 460 aa5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 FNIP1Q8TF40 1166 aa5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 ZNF512BQ96KM6 892 aaPredicted RBP5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 BRMS1Q9HCU9 246 aa5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 DBR1Q9UK59 544 aaKnown RBP5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 MINPP1Q9UNW1 487 aa5.89□□□□□ -1.47
CCDC144B-206ENST00000609959 SRGAP3O43295 1099 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 NCAM1P13591 858 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 POLR2BP30876 1174 aaKnown RBP5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 AUHQ13825 339 aaKnown RBP5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 SAPCD2Q86UD0 394 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 FERMT3Q86UX7 667 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 ATG4CQ96DT6 458 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 EHMT1Q9H9B1 1298 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 VTI1BQ9UEU0 232 aa5.88□□□□□ -1.47
CCDC144B-206ENST00000609959 SH3D21A4FU49 640 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 GARTP22102 1010 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 CTSKP43235 329 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 MVKQ03426 396 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 VWA3BQ502W6 1294 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 BICRALQ6AI39 1079 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 SND1Q7KZF4 910 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 SPATA25Q9BR10 227 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 PDLIM7Q9NR12 457 aa5.87□□□□□ -1.47
CCDC144B-206ENST00000609959 DBHP09172 617 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 GSTM1P09488 218 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 EIF4A3P38919 411 aaKnown RBP5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 GJA9P57773 515 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 FBXL19Q6PCT2 694 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 CRTC3Q6UUV7 619 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 USP48Q86UV5 1035 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 REXO1Q8N1G1 1221 aaKnown RBP5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 TMEM52Q8NDY8 209 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 FAM161BQ96MY7 647 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 SMPD4Q9NXE4 827 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 SRRDQ9UH36 339 aa5.86□□□□□ -1.47
CCDC144B-206ENST00000609959 F8W031 263 aaPredicted RBP5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 ZNF165P49910 485 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 CORO7P57737 925 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 ZXDAP98168 799 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 SLC6A18Q96N87 628 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 KCNQ5Q9NR82 932 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 KBTBD4Q9NVX7 518 aa5.85□□□□□ -1.47
CCDC144B-206ENST00000609959 GREM1O60565 184 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms