RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 GINM1Q9NU53 330 aa10.04□□□□□ -0.8
LINC01396-201ENST00000609099 GNL3LQ9NVN8 582 aaKnown RBP10.04□□□□□ -0.8
LINC01396-201ENST00000609099 ABCF2Q9UG63 623 aa10.04□□□□□ -0.8
LINC01396-201ENST00000609099 DENND2AQ9ULE3 1009 aa10.04□□□□□ -0.8
LINC01396-201ENST00000609099 PALD1Q9ULE6 856 aa10.04□□□□□ -0.8
LINC01396-201ENST00000609099 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
LINC01396-201ENST00000609099 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
LINC01396-201ENST00000609099 SPEGQ15772 3267 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 SIP14410 1827 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 TMEM221A6NGB7 291 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 M0R296 226 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 ASGR1P07306 291 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 PFKMP08237 780 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 CST5P28325 142 aaPredicted RBP10.03□□□□□ -0.8
LINC01396-201ENST00000609099 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
LINC01396-201ENST00000609099 EMP3P54852 163 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 CALD1Q05682 793 aaKnown RBP10.03□□□□□ -0.8
LINC01396-201ENST00000609099 ZP2Q05996 745 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
LINC01396-201ENST00000609099 MAPKAPK5Q8IW41 473 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 ADHFE1Q8IWW8 467 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 FBXL6Q8N531 539 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 TINF2Q9BSI4 451 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 KIAA1683Q9H0B3 1180 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 FRYQ5TBA9 3013 aa10.03□□□□□ -0.8
LINC01396-201ENST00000609099 MED19A0JLT2 244 aaPredicted RBP10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SEMA3EO15041 775 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 RALBP1Q15311 655 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 TCTN1Q2MV58 587 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 TEX11Q8IYF3 940 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SHCBP1Q8NEM2 672 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 ATG4CQ96DT6 458 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SLC9A7Q96T83 725 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SRCIN1Q9C0H9 1055 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 KATNBL1Q9H079 304 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 USP44Q9H0E7 712 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 SIL1Q9H173 461 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 TRPV6Q9H1D0 765 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 UPF3AQ9H1J1 476 aaKnown RBP10.02□□□□□ -0.81
LINC01396-201ENST00000609099 HMG20BQ9P0W2 317 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 PI4KBQ9UBF8 816 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 MUTYHQ9UIF7 546 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
LINC01396-201ENST00000609099 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
LINC01396-201ENST00000609099 PRR23AA6NEV1 266 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 MAP4K4O95819 1239 aaPredicted RBP10.01□□□□□ -0.81
LINC01396-201ENST00000609099 IRS1P35568 1242 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 PSEN1P49768 467 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 USP14P54578 494 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 EXOSC9Q06265 439 aaKnown RBP10.01□□□□□ -0.81
LINC01396-201ENST00000609099 COL9A2Q14055 689 aaPredicted RBP10.01□□□□□ -0.81
LINC01396-201ENST00000609099 KCTD2Q14681 263 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 TMEM132BQ14DG7 1078 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC01396-201ENST00000609099 TMEM63BQ5T3F8 832 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 SLC4A10Q6U841 1118 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 CLEC10AQ8IUN9 316 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 SIAH1Q8IUQ4 282 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 ABRAQ8N0Z2 381 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 NEK9Q8TD19 979 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 FEZ1Q99689 392 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 MROH8Q9H579 483 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
LINC01396-201ENST00000609099 FAM184BQ9ULE4 1060 aa10.01□□□□□ -0.81
LINC01396-201ENST00000609099 ZFYVE26Q68DK2 2539 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 LCTP09848 1927 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 H0Y858 1186 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 B4GALT4O60513 344 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 SHMT1P34896 483 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 VCPP55072 806 aaKnown RBP10□□□□□ -0.81
LINC01396-201ENST00000609099 TIMM10P62072 90 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 GPNMBQ14956 572 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 EP400NLQ6ZTU2 488 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 REPS2Q8NFH8 660 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 TGFBRAP1Q8WUH2 860 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 FSD1Q9BTV5 496 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 SEZ6LQ9BYH1 1024 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 TLR9Q9NR96 1032 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 HOXC10Q9NYD6 342 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 CTNNA3Q9UI47 895 aa10□□□□□ -0.81
LINC01396-201ENST00000609099 DDX49Q9Y6V7 483 aaKnown RBP10□□□□□ -0.81
LINC01396-201ENST00000609099 FASNP49327 2511 aaKnown RBP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 H3BQ06 376 aaPredicted RBP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 FCER1AP12319 257 aa9.99□□□□□ -0.81
LINC01396-201ENST00000609099 BEX3Q00994 111 aa9.99□□□□□ -0.81
LINC01396-201ENST00000609099 SPTY2D1Q68D10 685 aaPredicted RBP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 RNF135Q8IUD6 432 aa9.99□□□□□ -0.81
LINC01396-201ENST00000609099 ADSSL1Q8N142 457 aa9.99□□□□□ -0.81
LINC01396-201ENST00000609099 NKD2Q969F2 451 aaPredicted RBP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 AATFQ9NY61 560 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC01396-201ENST00000609099 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
LINC01396-201ENST00000609099 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms