RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
CTCFL-219ENST00000608720 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
CTCFL-219ENST00000608720 CHP1Q99653 195 aa16.45■□□□□ 0.22
CTCFL-219ENST00000608720 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-219ENST00000608720 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 PSMD14O00487 310 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 PSMA7O14818 248 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 RHOXF2BP0C7M4 288 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 MCM6Q14566 821 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 CCDC178Q5BJE1 867 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 LEKR1Q6ZMV7 388 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 RHOXF2Q9BQY4 288 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 CCSER1Q9C0I3 900 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 PDE11AQ9HCR9 933 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 LAMB2P55268 1798 aa16.44■□□□□ 0.22
CTCFL-219ENST00000608720 M0R2N6 131 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 LAD1O00515 517 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 UBA7P41226 1012 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 NAALADL2Q58DX5 795 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 ZNF662Q6ZS27 426 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
CTCFL-219ENST00000608720 REXO2Q9Y3B8 237 aaKnown RBP16.43■□□□□ 0.22
CTCFL-219ENST00000608720 FAM205AQ6ZU69 1335 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 DNM2P50570 870 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 VSNL1P62760 191 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 KRT83P78385 493 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 TFAP4Q01664 338 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 WDR93Q6P2C0 686 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
CTCFL-219ENST00000608720 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
CTCFL-219ENST00000608720 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 GUCA1BQ9UMX6 200 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 THRAP3Q9Y2W1 955 aaKnown RBP16.43■□□□□ 0.22
CTCFL-219ENST00000608720 COL4A1P02462 1669 aa16.43■□□□□ 0.22
CTCFL-219ENST00000608720 TRIM49BA6NDI0 452 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 KLRC4O43908 158 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 RPS8P62241 208 aaKnown RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 GRM4Q14833 912 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 TRAPPC11Q7Z392 1133 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PNMA1Q8ND90 353 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 DHTKD1Q96HY7 919 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 NUP58Q9BVL2 599 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 CUEDC2Q9H467 287 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 MAGEF1Q9HAY2 307 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 KBTBD4Q9NVX7 518 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PCDHA6Q9UN73 950 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PCDHA8Q9Y5H6 950 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 RREB1Q92766 1687 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PRPHP41219 470 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 PMS1P54277 932 aaKnown RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-219ENST00000608720 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 RETREG2Q8NC44 543 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 EHBP1Q8NDI1 1231 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 ACBD3Q9H3P7 528 aa16.42■□□□□ 0.22
CTCFL-219ENST00000608720 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 PES1O00541 588 aaKnown RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 SRGNP10124 158 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 MCM3P25205 808 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 KLRK1P26718 216 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 PRDX5P30044 214 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 LMAN1P49257 510 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 TTC31Q49AM3 519 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 MYCBPQ99417 103 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 JRKLQ9Y4A0 524 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 RGL2O15211 777 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 CASP8Q14790 479 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 MEA1Q16626 185 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 C12orf60Q5U649 245 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 TTI2Q6NXR4 508 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 NOA1Q8NC60 698 aaKnown RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 TMEM60Q9H2L4 133 aa16.41■□□□□ 0.22
CTCFL-219ENST00000608720 ZNHIT6Q9NWK9 470 aaKnown RBP16.41■□□□□ 0.22
CTCFL-219ENST00000608720 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
CTCFL-219ENST00000608720 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 CYLC1P35663 651 aaPredicted RBP16.4■□□□□ 0.22
CTCFL-219ENST00000608720 PPP1R2P41236 205 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 GYS2P54840 703 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
CTCFL-219ENST00000608720 PAPD7Q5XG87 772 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms