RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 ERGIC2Q96RQ1 377 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 RHOXF2Q9BQY4 288 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 PHF20Q9BVI0 1012 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 TMUB1Q9BVT8 246 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 IRX2Q9BZI1 471 aaPredicted RBP7.18□□□□□ -1.26
HDDC2-205ENST00000608456 NBPF3Q9H094 633 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 NAPBQ9H115 298 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 CSRNP2Q9H175 543 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 NUCKS1Q9H1E3 243 aaKnown RBP7.18□□□□□ -1.26
HDDC2-205ENST00000608456 SH3GLB2Q9NR46 395 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 ZSWIM5Q9P217 1185 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 MROH5Q6ZUA9 1318 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 TIAM2Q8IVF5 1701 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 RGPD2P0DJD1 1756 aa7.18□□□□□ -1.26
HDDC2-205ENST00000608456 COL22A1Q8NFW1 1626 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 TCRBV5S4A2TA0A5A2 114 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 B4E1Z4 1266 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 EXOC5O00471 708 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 FOXN1O15353 648 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PJA2O43164 708 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 DDAH1O94760 285 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 CHGBP05060 677 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 FGRP09769 529 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 SRGNP10124 158 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PDE6AP16499 860 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 INPP5BP32019 993 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PAFAH1B1P43034 410 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 VAV2P52735 878 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 SLC39A6Q13433 755 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 CCDC122Q5T0U0 273 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PPP4R3AQ6IN85 833 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NBPF10Q6P3W6 841 aaKnown RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PADI6Q6TGC4 694 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 CCDC84Q86UT8 332 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 MICU3Q86XE3 530 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 TBC1D10CQ8IV04 446 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 TEX2Q8IWB9 1127 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ZSCAN29Q8IWY8 852 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ADSSL1Q8N142 457 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NBPF15Q8N660 670 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NOA1Q8NC60 698 aaKnown RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 LPIN2Q92539 896 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ESR2Q92731 530 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PHKBQ93100 1093 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 CDC5LQ99459 802 aaKnown RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 CCSER1Q9C0I3 900 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 ACTR5Q9H9F9 607 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 LUC7LQ9NQ29 371 aaKnown RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 MAGEC2Q9UBF1 373 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NDUFB9Q9Y6M9 179 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 FAM169AQ9Y6X4 670 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PKD1L3Q7Z443 1732 aa7.17□□□□□ -1.26
HDDC2-205ENST00000608456 SOS2Q07890 1332 aaPredicted RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 PDS5AQ29RF7 1337 aaKnown RBP7.17□□□□□ -1.26
HDDC2-205ENST00000608456 NUP188Q5SRE5 1749 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 A0A0G2JLW4 131 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 ANKRD18BA2A2Z9 1011 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 GRID2IPA4D2P6 1211 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 NUTM2BA6NNL0 878 aaPredicted RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 NUTM2EB1AL46 878 aaPredicted RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 HMGB1P1B2RPK0 211 aaPredicted RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 AGPSO00116 658 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PSMA7O14818 248 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 CLGNO14967 610 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 CHUKO15111 745 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 MEFVO15553 781 aaPredicted RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 C21orf2O43822 256 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 HSF2BPO75031 334 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 N4BP1O75113 896 aaKnown RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 KIAA0754O94854 1291 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 RHOBTB3O94955 611 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PDE8BO95263 885 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 APPP05067 770 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PARP1P09874 1014 aaKnown RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 GGCXP38435 758 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PRPHP41219 470 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 GYS2P54840 703 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 UBXN1Q04323 297 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 GOLGA8FQ08AF8 430 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 GOLGA8DPQ0D2H9 430 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 SPA17Q15506 151 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 CCDC178Q5BJE1 867 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 SPDYCQ5MJ68 293 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 RRAGBQ5VZM2 374 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PDXDC2PQ6P474 469 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 LRIG3Q6UXM1 1119 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 KDM7AQ6ZMT4 941 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 KRT28Q7Z3Y7 464 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 KIAA1328Q86T90 577 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 METTL3Q86U44 580 aaKnown RBP7.16□□□□□ -1.26
HDDC2-205ENST00000608456 IFT20Q8IY31 132 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 ZNF654Q8IZM8 581 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 VGLL2Q8N8G2 317 aa7.16□□□□□ -1.26
HDDC2-205ENST00000608456 PXYLP1Q8TE99 480 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms