RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 IKQ13123 557 aaPredicted RBP18.85■□□□□ 0.61
HDDC2-203ENST00000608284 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
HDDC2-203ENST00000608284 SEZ6LQ9BYH1 1024 aa18.85■□□□□ 0.61
HDDC2-203ENST00000608284 NACAP1Q9BZK3 213 aa18.85■□□□□ 0.61
HDDC2-203ENST00000608284 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
HDDC2-203ENST00000608284 AP5M1Q9H0R1 490 aa18.85■□□□□ 0.61
HDDC2-203ENST00000608284 UPF3AQ9H1J1 476 aaKnown RBP18.85■□□□□ 0.61
HDDC2-203ENST00000608284 TSPYL2Q9H2G4 693 aaPredicted RBP18.85■□□□□ 0.61
HDDC2-203ENST00000608284 SLC38A10Q9HBR0 1119 aa18.85■□□□□ 0.61
HDDC2-203ENST00000608284 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 TTLL1O95922 423 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 FGBP02675 491 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 TNFAIP2Q03169 654 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 PPP4R3BQ5MIZ7 849 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 ARMCX2Q7L311 632 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 CHURC1Q8WUH1 139 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 MKL1Q969V6 931 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
HDDC2-203ENST00000608284 ZNFX1Q9P2E3 1918 aaKnown RBP18.84■□□□□ 0.61
HDDC2-203ENST00000608284 TTC28Q96AY4 2481 aa18.83■□□□□ 0.61
HDDC2-203ENST00000608284 VCANP13611 3396 aa18.83■□□□□ 0.61
HDDC2-203ENST00000608284 ASB14A6NK59 587 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 GSG1L2A8MUP6 293 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 ZFYP08048 801 aaPredicted RBP18.83■□□□□ 0.6
HDDC2-203ENST00000608284 TSPY3P0CV98 308 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 TSPY8P0CW00 308 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 ACRP10323 421 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 BMP3P12645 472 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 IGFBP4P22692 258 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 PDE4BQ07343 736 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 SLFN13Q68D06 897 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDDC2-203ENST00000608284 CCDC144CPQ8IYA2 1237 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 ACAD9Q9H845 621 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 IL23AQ9NPF7 189 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 HOMER2Q9NSB8 354 aa18.83■□□□□ 0.6
HDDC2-203ENST00000608284 RNF113AO15541 343 aaKnown RBP18.82■□□□□ 0.6
HDDC2-203ENST00000608284 CHGBP05060 677 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 FAM160B2Q86V87 743 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 RPUSD2Q8IZ73 545 aaKnown RBP18.82■□□□□ 0.6
HDDC2-203ENST00000608284 KBTBD3Q8NAB2 608 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 APPBP2Q92624 585 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 PRDM12Q9H4Q4 367 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 SLC28A3Q9HAS3 691 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 MYH8P13535 1937 aa18.82■□□□□ 0.6
HDDC2-203ENST00000608284 GRXCR1A8MXD5 290 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 STAT2P52630 851 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 MRPS5P82675 430 aaKnown RBP18.81■□□□□ 0.6
HDDC2-203ENST00000608284 TKFCQ3LXA3 575 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 USP38Q8NB14 1042 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 HERVK_113Q902F9 699 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 HIPK3Q9H422 1215 aa18.81■□□□□ 0.6
HDDC2-203ENST00000608284 PRDM1O75626 825 aa18.8■□□□□ 0.6
HDDC2-203ENST00000608284 CYP2C18P33260 490 aa18.8■□□□□ 0.6
HDDC2-203ENST00000608284 PBX2P40425 430 aa18.8■□□□□ 0.6
HDDC2-203ENST00000608284 RASIP1Q5U651 963 aa18.8■□□□□ 0.6
HDDC2-203ENST00000608284 LRRC47Q8N1G4 583 aaKnown RBP18.8■□□□□ 0.6
HDDC2-203ENST00000608284 BAZ2AQ9UIF9 1905 aaKnown RBP18.79■□□□□ 0.6
HDDC2-203ENST00000608284 IGKV6D-41A0A0C4DH26 115 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
HDDC2-203ENST00000608284 GPAA1O43292 621 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-203ENST00000608284 SLC1A4P43007 532 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 BEX3Q00994 111 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 ITGA7Q13683 1181 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 CCDC85BQ15834 202 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-203ENST00000608284 FSCN1Q16658 493 aaKnown RBP18.79■□□□□ 0.6
HDDC2-203ENST00000608284 CXCL17Q6UXB2 119 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 OSBP2Q969R2 916 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 ASB2Q96Q27 587 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
HDDC2-203ENST00000608284 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
HDDC2-203ENST00000608284 CD4P01730 458 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 NKX3-2P78367 333 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
HDDC2-203ENST00000608284 CNTN2Q02246 1040 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 NEDD1Q8NHV4 660 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 STAG1Q8WVM7 1258 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
HDDC2-203ENST00000608284 PLXNA1Q9UIW2 1896 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
HDDC2-203ENST00000608284 ALAS1P13196 640 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 COL9A1P20849 921 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 TFAP4Q01664 338 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 OTOP2Q7RTS6 562 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 IFNL3Q8IZI9 196 aa18.77■□□□□ 0.6
HDDC2-203ENST00000608284 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms