RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 RPS6KB1P23443 525 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 KRT85P78386 507 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 AMPD3Q01432 767 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 MAP3K11Q16584 847 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 ZNF713Q8N859 430 aaPredicted RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 SNX21Q969T3 373 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 BICD1Q96G01 975 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 CLMNQ96JQ2 1002 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 RMDN3Q96TC7 470 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 NUP88Q99567 741 aaPredicted RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 KIAA1683Q9H0B3 1180 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 MTMR4Q9NYA4 1195 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 GAKO14976 1311 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 DDX39AO00148 427 aaKnown RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 GAS7O60861 476 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 VEGFBP49765 207 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 PLCD1P51178 756 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 KCNV1Q6PIU1 500 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 ATG4CQ96DT6 458 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 JPH2Q9BR39 696 aaPredicted RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 RFX7Q2KHR2 1363 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 PFASO15067 1338 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 DCDC2CA8MYV0 355 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 KIF28PB7ZC32 967 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 GPR25O00155 361 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 CHMP2AO43633 222 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 TBC1D12O60347 775 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 KINO60870 393 aaKnown RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 EIF2AK2P19525 551 aaKnown RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 LBX1P52954 281 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 OTUD6AQ7L8S5 288 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 ANKRD23Q86SG2 305 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 PLA2G4DQ86XP0 818 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 PYM1Q9BRP8 204 aaKnown RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 ASCC2Q9H1I8 757 aaPredicted RBP5.85□□□□□ -1.47
SCARNA15-201ENST00000607520 COL18A1P39060 1754 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 PNMA6FA0A0J9YX94 578 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 GNRH1P01148 92 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 POTEIP0CG38 1075 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 POTEJP0CG39 1038 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 RFX1P22670 979 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 GALNT17Q6IS24 598 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 VGLL2Q8N8G2 317 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 TRIM6Q9C030 488 aaPredicted RBP5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 ZSWIM5Q9P217 1185 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 KCNG1Q9UIX4 513 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 LRFN2Q9ULH4 789 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 USP2O75604 605 aaPredicted RBP5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 CYP2C8P10632 490 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 NEDD9Q14511 834 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 ABI1Q8IZP0 508 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 PCSK9Q8NBP7 692 aaKnown RBP5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 IFT74Q96LB3 600 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 PCMTD1Q96MG8 357 aaPredicted RBP5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 CEP89Q96ST8 783 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 NRAPQ86VF7 1730 aa5.84□□□□□ -1.47
SCARNA15-201ENST00000607520 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 NR1I2O75469 434 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 GRK4P32298 578 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 HAUS3Q68CZ6 603 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 MIER3Q7Z3K6 550 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 SAPCD2Q86UD0 394 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 METTL13Q8N6R0 699 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 NECAB1Q8N987 351 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 CD99L2Q8TCZ2 262 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 ACER1Q8TDN7 264 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 MAP4K1Q92918 833 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 MTA3Q9BTC8 594 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 WDR18Q9BV38 432 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 FAM198AQ9UFP1 575 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 FZD1Q9UP38 647 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 TMX2Q9Y320 296 aa5.84□□□□□ -1.48
SCARNA15-201ENST00000607520 DYNC1LI2O43237 492 aaPredicted RBP5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 IDEP14735 1019 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 ERCC3P19447 782 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 HTRA3P83110 453 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 TSR1Q2NL82 804 aaKnown RBP5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 GNASQ5JWF2 1037 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 ZNF589Q86UQ0 364 aaPredicted RBP5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 SYCP3Q8IZU3 236 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 PIGSQ96S52 555 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 P2RX7Q99572 595 aaKnown RBP5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 RGPD2P0DJD1 1756 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 ZBTB5O15062 677 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 SCG2P13521 617 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 VCAM1P19320 739 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 C7orf31Q8N865 590 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 OR6J1Q8NGC5 347 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 TEKT3Q9BXF9 490 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 TM6SF1Q9BZW5 370 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 SPATC1LQ9H0A9 340 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 BECN2A8MW95 431 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 RASA1P20936 1047 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 ERVK-9P63128 1117 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 ERVK-24P63145 666 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 IGBP1P78318 339 aa5.83□□□□□ -1.48
SCARNA15-201ENST00000607520 PTH1RQ03431 593 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms