RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SBK1Q52WX2 424 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 NUP88Q99567 741 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-214ENST00000607020 PPP1R12CQ9BZL4 782 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 RAPGEFL1Q9UHV5 662 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 SYNPO2Q9UMS6 1093 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 BDP1A6H8Y1 2624 aa17.97■□□□□ 0.47
SSBP4-214ENST00000607020 RAD21O60216 631 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 BMP1P13497 986 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 CCDC85BQ15834 202 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-214ENST00000607020 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 MKL1Q969V6 931 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 HAUS7Q99871 368 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 TSPYL2Q9H2G4 693 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-214ENST00000607020 NKX2-4Q9H2Z4 354 aa17.96■□□□□ 0.47
SSBP4-214ENST00000607020 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-214ENST00000607020 YBX2Q9Y2T7 364 aaKnown RBP17.96■□□□□ 0.47
SSBP4-214ENST00000607020 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 RASA1P20936 1047 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSBP4-214ENST00000607020 RPAP2Q8IXW5 612 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-214ENST00000607020 CPXCR1Q8N123 301 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 IL27Q8NEV9 243 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 C1QTNF1Q9BXJ1 281 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 BOLA2Q9H3K6 86 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 HIPK3Q9H422 1215 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
SSBP4-214ENST00000607020 FEM1BQ9UK73 627 aa17.95■□□□□ 0.46
SSBP4-214ENST00000607020 GNEQ9Y223 722 aaKnown RBP17.95■□□□□ 0.46
SSBP4-214ENST00000607020 IGKV6D-41A0A0C4DH26 115 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 FDX1P10109 184 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 POU3F3P20264 500 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-214ENST00000607020 GIMAP6Q6P9H5 292 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 CCDC144CPQ8IYA2 1237 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 FAM122AQ96E09 287 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
SSBP4-214ENST00000607020 ARIH1Q9Y4X5 557 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-214ENST00000607020 PCDHA11Q9Y5I1 949 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 NAV1Q8NEY1 1877 aa17.94■□□□□ 0.46
SSBP4-214ENST00000607020 APBB1O00213 710 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 CHGBP05060 677 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 TNFAIP2Q03169 654 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 ITGA7Q13683 1181 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 AAK1Q2M2I8 961 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 ZSCAN25Q6NSZ9 544 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 RPUSD2Q8IZ73 545 aaKnown RBP17.93■□□□□ 0.46
SSBP4-214ENST00000607020 STRBPQ96SI9 672 aaKnown RBP17.93■□□□□ 0.46
SSBP4-214ENST00000607020 NOC4LQ9BVI4 516 aaKnown RBP17.93■□□□□ 0.46
SSBP4-214ENST00000607020 CLIP2Q9UDT6 1046 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 Q9Y3F1 56 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 CTDP1Q9Y5B0 961 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-214ENST00000607020 ASTN1O14525 1302 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 GRIN2DO15399 1336 aa17.93■□□□□ 0.46
SSBP4-214ENST00000607020 HMMRO75330 724 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 BEX3Q00994 111 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 CXCL17Q6UXB2 119 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 OTOP2Q7RTS6 562 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 VWCEQ96DN2 955 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 MKNK2Q9HBH9 465 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 SLC4A7Q9Y6M7 1214 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 UMODL1Q5DID0 1318 aa17.92■□□□□ 0.46
SSBP4-214ENST00000607020 ZNFX1Q9P2E3 1918 aaKnown RBP17.92■□□□□ 0.46
SSBP4-214ENST00000607020 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-214ENST00000607020 ASB14A6NK59 587 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 ZEB2O60315 1214 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 CNTN2Q02246 1040 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 FSCN1Q16658 493 aaKnown RBP17.91■□□□□ 0.46
SSBP4-214ENST00000607020 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 GMCL1P1Q8NEA9 526 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
SSBP4-214ENST00000607020 CHD7Q9P2D1 2997 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 GSG1L2A8MUP6 293 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 ERC2O15083 957 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
SSBP4-214ENST00000607020 PPP2R2DQ66LE6 453 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 IQSEC1Q6DN90 963 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 TLK2Q86UE8 772 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 ACAD9Q9H845 621 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 PARP14Q460N5 1801 aa17.9■□□□□ 0.46
SSBP4-214ENST00000607020 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 PFKMP08237 780 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 RABGGTBP53611 331 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 CCL23P55773 120 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 TKFCQ3LXA3 575 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
SSBP4-214ENST00000607020 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 AGBL1Q96MI9 1066 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 AP5M1Q9H0R1 490 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 TRPV6Q9H1D0 765 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
SSBP4-214ENST00000607020 A1CFQ9NQ94 594 aaKnown RBP17.89■□□□□ 0.45
SSBP4-214ENST00000607020 DYNC1LI2O43237 492 aaPredicted RBP17.88■□□□□ 0.45
SSBP4-214ENST00000607020 B4GALT4O60513 344 aa17.88■□□□□ 0.45
SSBP4-214ENST00000607020 TTLL1O95922 423 aa17.88■□□□□ 0.45
SSBP4-214ENST00000607020 SMPD1P17405 629 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms