RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 FANCBQ8NB91 859 aa17.21■□□□□ 0.34
RER1-209ENST00000605895 ORAI2Q96SN7 254 aa17.21■□□□□ 0.34
RER1-209ENST00000605895 VEZTQ9HBM0 779 aa17.21■□□□□ 0.34
RER1-209ENST00000605895 AATFQ9NY61 560 aaKnown RBP eCLIP17.21■□□□□ 0.349e-8■□□□□ 9.1
RER1-209ENST00000605895 STIM2Q9P246 746 aa17.21■□□□□ 0.34
RER1-209ENST00000605895 SNX12Q9UMY4 172 aa17.21■□□□□ 0.34
RER1-209ENST00000605895 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 MRC1P22897 1456 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 ERICH2A1L162 156 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 CHUKO15111 745 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 CYLC1P35663 651 aaPredicted RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 CLNS1AP54105 237 aaKnown RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 HLFQ16534 295 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 KLHL7Q8IXQ5 586 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 IFNL3Q8IZI9 196 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 DDX20Q9UHI6 824 aaKnown RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 RWDD2AQ9UIY3 292 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 OVOS2A0A0G2JMS6 1433 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 DEXIO95424 95 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 CABP4P57796 275 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 ODF2Q5BJF6 829 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 SH3RF1Q7Z6J0 888 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 OSBPL9Q96SU4 736 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
RER1-209ENST00000605895 SALL4Q9UJQ4 1053 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
RER1-209ENST00000605895 HLTFQ14527 1009 aaKnown RBP eCLIP17.19■□□□□ 0.34
RER1-209ENST00000605895 RASGRP4Q8TDF6 673 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 KDM3BQ7LBC6 1761 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 SLIT1O75093 1534 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 FECHP22830 423 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 MTIF2P46199 727 aaKnown RBP17.19■□□□□ 0.34
RER1-209ENST00000605895 QPCTQ16769 361 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 MIEF2Q96C03 454 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 EPN3Q9H201 632 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
RER1-209ENST00000605895 AKR1B10O60218 316 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 HEXIM1O94992 359 aaKnown RBP17.18■□□□□ 0.34
RER1-209ENST00000605895 EPHB4P54760 987 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 IL17AQ16552 155 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 CCDC121Q6ZUS5 278 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 DNM1LO00429 736 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 EPHB6O15197 1021 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 PPP1R37O75864 691 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 FTCDO95954 541 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 PEX19P40855 299 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 RASSF7Q02833 373 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 PTGISQ16647 500 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
RER1-209ENST00000605895 KRT12Q99456 494 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 TUBGCP2Q9BSJ2 902 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 FSBPO95073 299 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 KRT2P35908 639 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 ARID5AQ03989 594 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 DDX42Q86XP3 938 aaKnown RBP eCLIP17.18■□□□□ 0.34
RER1-209ENST00000605895 DNAJC7Q99615 494 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 MCM8Q9UJA3 840 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 CAPN11Q9UMQ6 739 aa17.18■□□□□ 0.34
RER1-209ENST00000605895 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 TACC1O75410 805 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 STAT6P42226 847 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 VAV2P52735 878 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 SPAG1Q07617 926 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 IFIT5Q13325 482 aaKnown RBP17.17■□□□□ 0.34
RER1-209ENST00000605895 IQCEQ6IPM2 695 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 MMRN2Q9H8L6 949 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 GPR108Q9NPR9 543 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.17■□□□□ 0.34
RER1-209ENST00000605895 MST1RQ04912 1400 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
RER1-209ENST00000605895 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
RER1-209ENST00000605895 PAFAH1B1P43034 410 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 ACCSLQ4AC99 568 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 AKNAD1Q5T1N1 836 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 GOLPH3Q9H4A6 298 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 BAIAP2L1Q9UHR4 511 aa17.17■□□□□ 0.34
RER1-209ENST00000605895 CCDC189A1A4V9 331 aa17.16■□□□□ 0.34
RER1-209ENST00000605895 PHKG2P15735 406 aa17.16■□□□□ 0.34
RER1-209ENST00000605895 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
RER1-209ENST00000605895 EIF4A3P38919 411 aaKnown RBP17.16■□□□□ 0.34
RER1-209ENST00000605895 TRIM14Q14142 442 aa17.16■□□□□ 0.34
RER1-209ENST00000605895 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
RER1-209ENST00000605895 FAM228AQ86W67 206 aa17.16■□□□□ 0.34
RER1-209ENST00000605895 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms