RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CARSP49589 748 aaKnown RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 GUCY2FP51841 1108 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 VAV2P52735 878 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF662Q6ZS27 426 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 IFT81Q8WYA0 676 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 CAVIN3Q969G5 261 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 FERMT2Q96AC1 680 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC114Q96M63 670 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 EPB41L4AQ9HCS5 686 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 TACC1O75410 805 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 PAX7P23759 505 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 PTGDRQ13258 359 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 E2F5Q15329 346 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 TRIM58Q8NG06 486 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 TRIM47Q96LD4 638 aa13.86□□□□□ -0.19
CDCA3-212ENST00000604599 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
CDCA3-212ENST00000604599 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 A0A1W2PQC6 194 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 SATB1Q01826 763 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 SPRED3Q2MJR0 410 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 SLC24A3Q9HC58 644 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-212ENST00000604599 H7C1D1 291 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 PHKG2P15735 406 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 PDE6AP16499 860 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 KRT2P35908 639 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 DNA2P51530 1060 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 SPA17Q15506 151 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 KIRREL3Q8IZU9 778 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 CHD4Q14839 1912 aa13.85□□□□□ -0.19
CDCA3-212ENST00000604599 NEBLO76041 1014 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 GLI1P08151 1106 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 MDH1P40925 334 aaKnown RBP13.84□□□□□ -0.19
CDCA3-212ENST00000604599 SNCBQ16143 134 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 MFSD6Q6ZSS7 791 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC42Q96M95 316 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
CDCA3-212ENST00000604599 IFIH1Q9BYX4 1025 aaKnown RBP13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ADAMTS7Q9UKP4 1686 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 TJP1Q07157 1748 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ATP2C2O75185 946 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 GCFC2P16383 781 aaKnown RBP13.84□□□□□ -0.19
CDCA3-212ENST00000604599 TTC38Q5R3I4 469 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 WLSQ5T9L3 541 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 CYB5D1Q6P9G0 228 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC121Q6ZUS5 278 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ZNF654Q8IZM8 581 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ANKRD13CQ8N6S4 541 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 MS4A14Q96JA4 679 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 TTYH3Q9C0H2 523 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 MAGEC2Q9UBF1 373 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-212ENST00000604599 HYOU1Q9Y4L1 999 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 AKAP11Q9UKA4 1901 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 PKD1L3Q7Z443 1732 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ERICH2A1L162 156 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ZPR1O75312 459 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 FAM107AO95990 144 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 GUCY2DQ02846 1103 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 ITIH3Q06033 890 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 RUBCNQ92622 972 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 FAXDC2Q96IV6 333 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 UBAC1Q9BSL1 405 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 SH2D4AQ9H788 454 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 HAUS2Q9NVX0 235 aa13.84□□□□□ -0.19
CDCA3-212ENST00000604599 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 BACH1O14867 736 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
CDCA3-212ENST00000604599 MBD4O95243 580 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 DNM2P50570 870 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 PLCB4Q15147 1175 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
CDCA3-212ENST00000604599 ZNF572Q7Z3I7 529 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms