RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PSMC4P43686 418 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 METAP2P50579 478 aaKnown RBP eCLIP11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 IRF5Q13568 498 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RTN1Q16799 776 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ADGRF4Q8IZF3 695 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FAM177A1Q8N128 213 aaPredicted RBP11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TRIM47Q96LD4 638 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 LRRC2Q9BYS8 371 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 EFCC1Q9HA90 598 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SLC5A4Q9NY91 659 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PFASO15067 1338 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZNF536O15090 1300 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ABCB11O95342 1321 aa11.01□□□□□ -0.65
SQSTM1P1-201ENST00000603451 LOC102724159A0A0B4J2E5 919 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ST18O60284 1047 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CDKL5O76039 1030 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 HOXC6P09630 235 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GOLGA8HP0CJ92 632 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FCER1AP12319 257 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 XRCC5P13010 732 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CPA1P15085 419 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ERCC3P19447 782 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MCM2P49736 904 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NEK4P51957 841 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 APOBRQ0VD83 1088 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GRB14Q14449 540 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PWP2Q15269 919 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TTBK2Q6IQ55 1244 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GPR142Q7Z601 462 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PLEKHH3Q7Z736 793 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RGS22Q8NE09 1264 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RRP36Q96EU6 259 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 KIF2CQ99661 725 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 AMNQ9BXJ7 453 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ACAD9Q9H845 621 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CWC22Q9HCG8 908 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SRRDQ9UH36 339 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CCPG1Q9ULG6 757 aa11□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PNMA6FA0A0J9YX94 578 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PDIA3P30101 505 aaKnown RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SLC16A2P36021 539 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GHRHRQ02643 423 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PLS1Q14651 629 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 KCTD2Q14681 263 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 QRICH1Q2TAL8 776 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 Q3C1V9 767 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PPP1R18Q6NYC8 613 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FBXO46Q6PJ61 603 aaPredicted RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 APBA2Q99767 749 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MYL10Q9BUA6 226 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RNF26Q9BY78 433 aaPredicted RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PORCNQ9H237 461 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SH2B1Q9NRF2 756 aaPredicted RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZNFX1Q9P2E3 1918 aaKnown RBP10.99□□□□□ -0.65
SQSTM1P1-201ENST00000603451 DOCK3Q8IZD9 2030 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CYTH3O43739 400 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 IFNAR1P17181 557 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PTPREP23469 700 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RGS2P41220 211 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 AK2P54819 239 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MAP2K5Q13163 448 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MORN1Q5T089 497 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NCAPG2Q86XI2 1143 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FBXO11Q86XK2 927 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MCF2L2Q86YR7 1114 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CPXCR1Q8N123 301 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MSL3Q8N5Y2 521 aaKnown RBP10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 USP6NLQ92738 828 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 UBA5Q9GZZ9 404 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MRPL11Q9Y3B7 192 aaKnown RBP10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TRIM17Q9Y577 477 aa10.98□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CPLX1O14810 134 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms