RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 SCN5AQ14524 2016 aa17.53■□□□□ 0.4
TRIM11-205ENST00000602308 COL11A1P12107 1806 aaPredicted RBP17.53■□□□□ 0.4
TRIM11-205ENST00000602308 PTPRCP08575 1304 aa17.52■□□□□ 0.4
TRIM11-205ENST00000602308 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.52■□□□□ 0.4
TRIM11-205ENST00000602308 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.4
TRIM11-205ENST00000602308 UBTFL1P0CB47 393 aaPredicted RBP17.52■□□□□ 0.4
TRIM11-205ENST00000602308 CYP2C9P11712 490 aa17.52■□□□□ 0.4
TRIM11-205ENST00000602308 REPS2Q8NFH8 660 aa17.52■□□□□ 0.4
TRIM11-205ENST00000602308 KATNBL1Q9H079 304 aa17.52■□□□□ 0.4
TRIM11-205ENST00000602308 PRKAG3Q9UGI9 489 aa17.52■□□□□ 0.4
TRIM11-205ENST00000602308 CACNA1BQ00975 2339 aa17.52■□□□□ 0.39
TRIM11-205ENST00000602308 PARP14Q460N5 1801 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 VWA5AO00534 786 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
TRIM11-205ENST00000602308 PTGS1P23219 599 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 EVX2Q03828 476 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 GABPAQ06546 454 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 BMP8AQ7Z5Y6 402 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
TRIM11-205ENST00000602308 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
TRIM11-205ENST00000602308 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 ADHFE1Q8IWW8 467 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 FGD4Q96M96 766 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 PRRX2Q99811 253 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
TRIM11-205ENST00000602308 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
TRIM11-205ENST00000602308 TRMT13Q9NUP7 481 aaKnown RBP17.51■□□□□ 0.39
TRIM11-205ENST00000602308 WDR46O15213 610 aaKnown RBP17.5■□□□□ 0.39
TRIM11-205ENST00000602308 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
TRIM11-205ENST00000602308 HERC4Q5GLZ8 1057 aaPredicted RBP17.5■□□□□ 0.39
TRIM11-205ENST00000602308 MIGA1Q8NAN2 632 aa17.5■□□□□ 0.39
TRIM11-205ENST00000602308 UPF3BQ9BZI7 483 aaKnown RBP17.5■□□□□ 0.39
TRIM11-205ENST00000602308 VCPKMTQ9H867 229 aa17.5■□□□□ 0.39
TRIM11-205ENST00000602308 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
TRIM11-205ENST00000602308 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
TRIM11-205ENST00000602308 COPB2P35606 906 aa17.49■□□□□ 0.39
TRIM11-205ENST00000602308 ERVK-21P61565 698 aa17.49■□□□□ 0.39
TRIM11-205ENST00000602308 FSCN1Q16658 493 aaKnown RBP17.49■□□□□ 0.39
TRIM11-205ENST00000602308 ARMCX2Q7L311 632 aa17.49■□□□□ 0.39
TRIM11-205ENST00000602308 GNEQ9Y223 722 aaKnown RBP17.49■□□□□ 0.39
TRIM11-205ENST00000602308 DMDP11532 3685 aa17.49■□□□□ 0.39
TRIM11-205ENST00000602308 KRT37O76014 449 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 CYP7A1P22680 504 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 TNFAIP2Q03169 654 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 MAGEB6Q8N7X4 407 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 EDAQ92838 391 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 PBXIP1Q96AQ6 731 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
TRIM11-205ENST00000602308 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 MCM3APO60318 1980 aa17.48■□□□□ 0.39
TRIM11-205ENST00000602308 RIF1Q5UIP0 2472 aaKnown RBP17.47■□□□□ 0.39
TRIM11-205ENST00000602308 PTPRSQ13332 1948 aa17.47■□□□□ 0.39
TRIM11-205ENST00000602308 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
TRIM11-205ENST00000602308 RFC2P35250 354 aa17.47■□□□□ 0.39
TRIM11-205ENST00000602308 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
TRIM11-205ENST00000602308 TLK2Q86UE8 772 aa17.47■□□□□ 0.39
TRIM11-205ENST00000602308 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
TRIM11-205ENST00000602308 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
TRIM11-205ENST00000602308 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRIM11-205ENST00000602308 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
TRIM11-205ENST00000602308 TMEM179Q6ZVK1 233 aa17.46■□□□□ 0.39
TRIM11-205ENST00000602308 RNF135Q8IUD6 432 aa17.46■□□□□ 0.39
TRIM11-205ENST00000602308 ATOH1Q92858 354 aaPredicted RBP17.46■□□□□ 0.39
TRIM11-205ENST00000602308 FAM50BQ9Y247 325 aa17.46■□□□□ 0.39
TRIM11-205ENST00000602308 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.38
TRIM11-205ENST00000602308 TNKSO95271 1327 aa17.46■□□□□ 0.38
TRIM11-205ENST00000602308 CACNA1GO43497 2377 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 TMEM221A6NGB7 291 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 M0R296 226 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 DYNC1LI2O43237 492 aaPredicted RBP17.45■□□□□ 0.38
TRIM11-205ENST00000602308 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
TRIM11-205ENST00000602308 SUPT20HL2P0C7V6 817 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 WDR5P61964 334 aaKnown RBP17.45■□□□□ 0.38
TRIM11-205ENST00000602308 PKN1Q16512 942 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
TRIM11-205ENST00000602308 ASCL5Q7RTU5 278 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 TEX13BQ9BXU2 312 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 ARHGEF10LQ9HCE6 1279 aa17.45■□□□□ 0.38
TRIM11-205ENST00000602308 ZEB2O60315 1214 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 ZAP70P43403 619 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 KCNJ6P48051 423 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 DEFB103AP81534 67 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 ICA1Q05084 483 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 TRIM67Q6ZTA4 783 aa17.44■□□□□ 0.38
TRIM11-205ENST00000602308 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
TRIM11-205ENST00000602308 PABPC5Q96DU9 382 aaKnown RBP17.44■□□□□ 0.38
TRIM11-205ENST00000602308 FAM186AA6NE01 2351 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 SMPD1P17405 629 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 ID4P47928 161 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 COL19A1Q14993 1142 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIM11-205ENST00000602308 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
TRIM11-205ENST00000602308 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms