RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.29■□□□□ 0.68
SSBP4-211ENST00000601614 FGBP02675 491 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 PTGS1P23219 599 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 ADD2P35612 726 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 KCNQ1P51787 676 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 MICALL1Q8N3F8 863 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 SLC43A3Q8NBI5 491 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.29■□□□□ 0.68
SSBP4-211ENST00000601614 ABHD16BQ9H3Z7 469 aa19.29■□□□□ 0.68
SSBP4-211ENST00000601614 GRIN2DO15399 1336 aa19.28■□□□□ 0.68
SSBP4-211ENST00000601614 ZBED9Q6R2W3 1325 aa19.28■□□□□ 0.68
SSBP4-211ENST00000601614 TLR3O15455 904 aaKnown RBP19.28■□□□□ 0.68
SSBP4-211ENST00000601614 NKX3-2P78367 333 aa19.28■□□□□ 0.68
SSBP4-211ENST00000601614 ERC1Q8IUD2 1116 aa19.28■□□□□ 0.68
SSBP4-211ENST00000601614 HIPK3Q9H422 1215 aa19.28■□□□□ 0.68
SSBP4-211ENST00000601614 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 CCL23P55773 120 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 CXCL17Q6UXB2 119 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■■□ 26.7
SSBP4-211ENST00000601614 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 WNT8AQ9H1J5 351 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
SSBP4-211ENST00000601614 RAVER2Q9HCJ3 691 aaKnown RBP19.27■□□□□ 0.68
SSBP4-211ENST00000601614 LCTP09848 1927 aa19.27■□□□□ 0.67
SSBP4-211ENST00000601614 F5H6K3 240 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 RFXAPO00287 272 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 NDUFB10O96000 172 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 KLRC3Q07444 240 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 PPP2R2DQ66LE6 453 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 C1QTNF1Q9BXJ1 281 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 EPHX3Q9H6B9 360 aa19.26■□□□□ 0.67
SSBP4-211ENST00000601614 TRANK1O15050 2925 aa19.25■□□□□ 0.67
SSBP4-211ENST00000601614 CNTN2Q02246 1040 aa19.25■□□□□ 0.67
SSBP4-211ENST00000601614 NOC4LQ9BVI4 516 aaKnown RBP19.25■□□□□ 0.67
SSBP4-211ENST00000601614 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
SSBP4-211ENST00000601614 PAG1Q9NWQ8 432 aa19.25■□□□□ 0.67
SSBP4-211ENST00000601614 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
SSBP4-211ENST00000601614 B4GALT4O60513 344 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 RASA1P20936 1047 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
SSBP4-211ENST00000601614 ANKRD35Q8N283 1001 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
SSBP4-211ENST00000601614 LRFN3Q9BTN0 628 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 TRPV6Q9H1D0 765 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 BOLA2Q9H3K6 86 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 SLC38A10Q9HBR0 1119 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
SSBP4-211ENST00000601614 SLC4A4Q9Y6R1 1079 aa19.24■□□□□ 0.67
SSBP4-211ENST00000601614 ITGA7Q13683 1181 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 TMEM63BQ5T3F8 832 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 KRT40Q6A162 431 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 STK11IPQ8N1F8 1099 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 KIFC2Q96AC6 838 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 SCLYQ96I15 445 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
SSBP4-211ENST00000601614 NYAP2Q9P242 653 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 PTPRSQ13332 1948 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 BRWD1Q9NSI6 2320 aa19.23■□□□□ 0.67
SSBP4-211ENST00000601614 EPOPA6NHQ4 379 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 ERC2O15083 957 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 PSMC6P62333 389 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 TNFAIP2Q03169 654 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 TLK2Q86UE8 772 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 AMOTL1Q8IY63 956 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
SSBP4-211ENST00000601614 FAM133AQ8N9E0 248 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 AGBL1Q96MI9 1066 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 PUS7LQ9H0K6 701 aaKnown RBP19.22■□□□□ 0.67
SSBP4-211ENST00000601614 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 MTCH2Q9Y6C9 303 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 SLC4A7Q9Y6M7 1214 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 TET1Q8NFU7 2136 aa19.22■□□□□ 0.67
SSBP4-211ENST00000601614 COL4A4P53420 1690 aaPredicted RBP19.21■□□□□ 0.67
SSBP4-211ENST00000601614 SOWAHBA6NEL2 793 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 ZBED4O75132 1171 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 TTLL4Q14679 1199 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 SKIV2LQ15477 1246 aaKnown RBP19.21■□□□□ 0.67
SSBP4-211ENST00000601614 CHST13Q8NET6 341 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 KHSRPQ92945 711 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSBP4-211ENST00000601614 CERS4Q9HA82 394 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 HOMER2Q9NSB8 354 aa19.21■□□□□ 0.67
SSBP4-211ENST00000601614 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 IFIT2P09913 472 aaKnown RBP19.2■□□□□ 0.66
SSBP4-211ENST00000601614 SMPD1P17405 629 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 POU3F3P20264 500 aaPredicted RBP19.2■□□□□ 0.66
SSBP4-211ENST00000601614 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 FSCN1Q16658 493 aaKnown RBP19.2■□□□□ 0.66
SSBP4-211ENST00000601614 HSP90AB4PQ58FF6 505 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 NOL8Q76FK4 1167 aaKnown RBP19.2■□□□□ 0.66
SSBP4-211ENST00000601614 KIF1BPQ96EK5 621 aa19.2■□□□□ 0.66
SSBP4-211ENST00000601614 PDGFCQ9NRA1 345 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms