RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 U2AF1L4Q8WU68 220 aaKnown RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 MMP19Q99542 508 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 RAVER2Q9HCJ3 691 aaKnown RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 HMX1Q9NP08 348 aaPredicted RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
LINC00649-212ENST00000601471 FBXO40Q9UH90 709 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 WDR19Q8NEZ3 1342 aa11.23□□□□□ -0.61
LINC00649-212ENST00000601471 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 SGPL1O95470 568 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 MYCP01106 439 aaPredicted RBP11.22□□□□□ -0.61
LINC00649-212ENST00000601471 CYBAP13498 195 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 TROAPQ12815 778 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 COL9A3Q14050 684 aaPredicted RBP11.22□□□□□ -0.61
LINC00649-212ENST00000601471 ASPRV1Q53RT3 343 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
LINC00649-212ENST00000601471 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
LINC00649-212ENST00000601471 RALYLQ86SE5 291 aaKnown RBP11.22□□□□□ -0.61
LINC00649-212ENST00000601471 DPP9Q86TI2 863 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 CPXCR1Q8N123 301 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 IGDCC4Q8TDY8 1250 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 KCNB2Q92953 911 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 FGD4Q96M96 766 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 AGBL1Q96MI9 1066 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 SLC5A4Q9NY91 659 aa11.22□□□□□ -0.61
LINC00649-212ENST00000601471 CEP290O15078 2479 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.61
LINC00649-212ENST00000601471 PGK2P07205 417 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 SLC16A2P36021 539 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 IKQ13123 557 aaPredicted RBP11.21□□□□□ -0.61
LINC00649-212ENST00000601471 MFSD14CQ5VZR4 134 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 MAMDC4Q6UXC1 1216 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
LINC00649-212ENST00000601471 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 DEFB118Q96PH6 123 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 SENP2Q9HC62 589 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.61
LINC00649-212ENST00000601471 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 MTMR7Q9Y216 660 aa11.21□□□□□ -0.61
LINC00649-212ENST00000601471 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 IFIT3O14879 490 aaKnown RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 CCND3P30281 292 aaPredicted RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 CYP2C19P33261 490 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MCM5P33992 734 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 SART3Q15020 963 aaKnown RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 RNF20Q5VTR2 975 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 LHX8Q68G74 356 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MAP3K14Q99558 947 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
LINC00649-212ENST00000601471 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 CTDP1Q9Y5B0 961 aaPredicted RBP11.2□□□□□ -0.62
LINC00649-212ENST00000601471 MYH6P13533 1939 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 ASTN1O14525 1302 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 PFASO15067 1338 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 SH2B2O14492 632 aaPredicted RBP11.19□□□□□ -0.62
LINC00649-212ENST00000601471 PARP1P09874 1014 aaKnown RBP11.19□□□□□ -0.62
LINC00649-212ENST00000601471 HSPA4P34932 840 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 LIFRP42702 1097 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 SNAP25P60880 206 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 GRM4Q14833 912 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 WTAPQ15007 396 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 SLC35G1Q2M3R5 365 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 CCDC174Q6PII3 467 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 CLEC4DQ8WXI8 215 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 TRERF1Q96PN7 1200 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 MAF1Q9H063 256 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 CYP39A1Q9NYL5 469 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 SZT2Q5T011 3432 aa11.19□□□□□ -0.62
LINC00649-212ENST00000601471 MCM3APO60318 1980 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 ALPK3Q96L96 1907 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 ERICH2A1L162 156 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 SEPT4O43236 478 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 PRC1O43663 620 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 MSCO60682 206 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 DDAH1O94760 285 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 ALAS1P13196 640 aa11.18□□□□□ -0.62
LINC00649-212ENST00000601471 TAL1P17542 331 aaPredicted RBP11.18□□□□□ -0.62
LINC00649-212ENST00000601471 GHRHRQ02643 423 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms