RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SLC38A10Q9HBR0 1119 aa23.67■■□□□ 1.38
PNKP-215ENST00000600910 DEXIO95424 95 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 PKN1Q16512 942 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 QRICH1Q2TAL8 776 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 MYH6P13533 1939 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 PNMA6FA0A0J9YX94 578 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 ZBED4O75132 1171 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 FDX1P10109 184 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 PFKFB3Q16875 520 aaPredicted RBP23.66■■□□□ 1.38
PNKP-215ENST00000600910 OTUD7BQ6GQQ9 843 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 CCDC174Q6PII3 467 aa23.66■■□□□ 1.38
PNKP-215ENST00000600910 ZCCHC17Q9NP64 241 aaKnown RBP23.66■■□□□ 1.38
PNKP-215ENST00000600910 CTDP1Q9Y5B0 961 aaPredicted RBP23.66■■□□□ 1.38
PNKP-215ENST00000600910 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
PNKP-215ENST00000600910 LBX2Q6XYB7 198 aa23.65■■□□□ 1.38
PNKP-215ENST00000600910 FAM184AQ8NB25 1140 aa23.65■■□□□ 1.38
PNKP-215ENST00000600910 AIFM3Q96NN9 605 aa23.65■■□□□ 1.38
PNKP-215ENST00000600910 IPO9Q96P70 1041 aaKnown RBP23.65■■□□□ 1.38
PNKP-215ENST00000600910 PARK7Q99497 189 aaKnown RBP23.65■■□□□ 1.38
PNKP-215ENST00000600910 PPP1R11O60927 126 aaPredicted RBP23.64■■□□□ 1.38
PNKP-215ENST00000600910 SCG2P13521 617 aa23.64■■□□□ 1.38
PNKP-215ENST00000600910 REM2Q8IYK8 340 aaPredicted RBP23.64■■□□□ 1.38
PNKP-215ENST00000600910 REPS2Q8NFH8 660 aa23.64■■□□□ 1.38
PNKP-215ENST00000600910 SMCR8Q8TEV9 937 aaPredicted RBP23.64■■□□□ 1.38
PNKP-215ENST00000600910 A0A0G2JMZ2 1700 aa23.64■■□□□ 1.37
PNKP-215ENST00000600910 COL11A1P12107 1806 aaPredicted RBP23.64■■□□□ 1.37
PNKP-215ENST00000600910 MAP2K2P36507 400 aa23.63■■□□□ 1.37
PNKP-215ENST00000600910 CPXCR1Q8N123 301 aa23.63■■□□□ 1.37
PNKP-215ENST00000600910 WASF1Q92558 559 aa23.63■■□□□ 1.37
PNKP-215ENST00000600910 GPKOWQ92917 476 aaPredicted RBP eCLIP23.63■■□□□ 1.37
PNKP-215ENST00000600910 RAVER2Q9HCJ3 691 aaKnown RBP23.63■■□□□ 1.37
PNKP-215ENST00000600910 ZNF536O15090 1300 aa23.63■■□□□ 1.37
PNKP-215ENST00000600910 TMEM132BQ14DG7 1078 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 TAF1CQ15572 869 aaPredicted RBP23.62■■□□□ 1.37
PNKP-215ENST00000600910 HEATR3Q7Z4Q2 680 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 FBXO11Q86XK2 927 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 MB21D1Q8N884 522 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 ALG1Q9BT22 464 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 PEX10O60683 326 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 ICAM1P05362 532 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 WWC2Q6AWC2 1192 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 PAGR1Q9BTK6 254 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 AMNQ9BXJ7 453 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 BTBD7Q9P203 1132 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
PNKP-215ENST00000600910 KIF3AQ9Y496 699 aa23.62■■□□□ 1.37
PNKP-215ENST00000600910 TAL1P17542 331 aaPredicted RBP23.61■■□□□ 1.37
PNKP-215ENST00000600910 USH1GQ495M9 461 aa23.61■■□□□ 1.37
PNKP-215ENST00000600910 GTF3C2Q8WUA4 911 aaPredicted RBP23.61■■□□□ 1.37
PNKP-215ENST00000600910 COA7Q96BR5 231 aa23.61■■□□□ 1.37
PNKP-215ENST00000600910 AGBL1Q96MI9 1066 aa23.61■■□□□ 1.37
PNKP-215ENST00000600910 RBPJLQ9UBG7 517 aa23.61■■□□□ 1.37
PNKP-215ENST00000600910 THSD7BQ9C0I4 1608 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 FOSBP53539 338 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 OAZ1P54368 228 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 PLS1Q14651 629 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 TXNRD2Q9NNW7 524 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 BARHL2Q9NY43 387 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 VPS54Q9P1Q0 977 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 CCPG1Q9ULG6 757 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 RABGAP1Q9Y3P9 1069 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 PCDHA1Q9Y5I3 950 aa23.6■■□□□ 1.37
PNKP-215ENST00000600910 hCG_1984214I3L0E3 225 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 ATP2A1O14983 1001 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 CNMDO75829 334 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 GCLCP48506 637 aaPredicted RBP23.59■■□□□ 1.37
PNKP-215ENST00000600910 ZNF713Q8N859 430 aaPredicted RBP23.59■■□□□ 1.37
PNKP-215ENST00000600910 GJB4Q9NTQ9 266 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 STXBP3O00186 592 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 ALDH1A1P00352 501 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 SNRNP48Q6IEG0 339 aaKnown RBP23.59■■□□□ 1.37
PNKP-215ENST00000600910 TYW1BQ6NUM6 668 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 SHISA4Q96DD7 197 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 TEX13BQ9BXU2 312 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 CWC22Q9HCG8 908 aaKnown RBP23.59■■□□□ 1.37
PNKP-215ENST00000600910 PCNTO95613 3336 aa23.59■■□□□ 1.37
PNKP-215ENST00000600910 STAT3P40763 770 aa23.58■■□□□ 1.36
PNKP-215ENST00000600910 NAPAP54920 295 aa23.58■■□□□ 1.36
PNKP-215ENST00000600910 ANKRD13CQ8N6S4 541 aa23.58■■□□□ 1.36
PNKP-215ENST00000600910 C8orf76Q96K31 380 aa23.58■■□□□ 1.36
PNKP-215ENST00000600910 ZFYVE28Q9HCC9 887 aa23.58■■□□□ 1.36
PNKP-215ENST00000600910 ADGRA2Q96PE1 1338 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 XBP1P17861 261 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 TRAF1Q13077 416 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 CRHR2Q13324 411 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 LARP1BQ659C4 914 aaKnown RBP23.57■■□□□ 1.36
PNKP-215ENST00000600910 SPATC1LQ9H0A9 340 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 SH3GLB2Q9NR46 395 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 PNMA2Q9UL42 364 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 RIPK3Q9Y572 518 aa23.57■■□□□ 1.36
PNKP-215ENST00000600910 SMCHD1A6NHR9 2005 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 CA12O43570 354 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 ALAS1P13196 640 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 ERVK-9P63128 1117 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 ERVK-24P63145 666 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 Q3C1V9 767 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 ABCB11O95342 1321 aa23.56■■□□□ 1.36
PNKP-215ENST00000600910 TLR2O60603 784 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 GUCY1B3Q02153 619 aa23.55■■□□□ 1.36
PNKP-215ENST00000600910 TRIM29Q14134 588 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms