RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ACAD9Q9H845 621 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.76
NOTCH3-205ENST00000600841 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 SMCHD1A6NHR9 2005 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 DNAH12Q6ZR08 3092 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 DNAJC25-GNG10A0A024R161 153 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 SGSM2O43147 1006 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 SLC16A2P36021 539 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 SNAP25P60880 206 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 ZSCAN10Q96SZ4 725 aaPredicted RBP19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 RNF146Q9NTX7 359 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 ZSWIM5Q9P217 1185 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 U3KPZ7 1027 aaPredicted RBP19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 ALPK3Q96L96 1907 aa19.76■□□□□ 0.75
NOTCH3-205ENST00000600841 SNHG28P0DPA3 235 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 ALAS1P13196 640 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 PTH1RQ03431 593 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 ZNF543Q08ER8 600 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 TRERF1Q96PN7 1200 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 UBAC1Q9BSL1 405 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 RANBP17Q9H2T7 1088 aaKnown RBP19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 CCPG1Q9ULG6 757 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
NOTCH3-205ENST00000600841 COL6A1P12109 1028 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 ZNF467Q7Z7K2 595 aaPredicted RBP19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 ENAHQ8N8S7 591 aaPredicted RBP19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 PNMA1Q8ND90 353 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 ANKS1AQ92625 1134 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 KAT14Q9H8E8 782 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 PFASO15067 1338 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 SYNGAP1Q96PV0 1343 aa19.74■□□□□ 0.75
NOTCH3-205ENST00000600841 ICAM1P05362 532 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 TRDNQ13061 729 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 GPATCH4Q5T3I0 446 aaKnown RBP19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 MAMDC4Q6UXC1 1216 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 ARRDC4Q8NCT1 418 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 MCM3APO60318 1980 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 TNKSO95271 1327 aa19.73■□□□□ 0.75
NOTCH3-205ENST00000600841 POTEB2H3BUK9 544 aa19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 DNM1LO00429 736 aa19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 CYP21A2P08686 494 aa19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 TAL1P17542 331 aaPredicted RBP19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 A1CFQ9NQ94 594 aaKnown RBP19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 PNMA2Q9UL42 364 aa19.72■□□□□ 0.75
NOTCH3-205ENST00000600841 ZNF865P0CJ78 1059 aaPredicted RBP19.71■□□□□ 0.75
NOTCH3-205ENST00000600841 RARBP10826 455 aa19.71■□□□□ 0.75
NOTCH3-205ENST00000600841 KIAA1211Q6ZU35 1233 aa19.71■□□□□ 0.75
NOTCH3-205ENST00000600841 C7orf61Q8IZ16 206 aa19.71■□□□□ 0.75
NOTCH3-205ENST00000600841 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 SNAI1O95863 264 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 MYCNP04198 464 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 GOLGA8HP0CJ92 632 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 AKR1A1P14550 325 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 CNTN2Q02246 1040 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 BMP2KLQ5H9B9 411 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 MUM1L1Q5H9M0 696 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 GJC2Q5T442 439 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 IFIT1BQ5T764 474 aaKnown RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 SKAP1Q86WV1 359 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 FAM133AQ8N9E0 248 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 MAP4K1Q92918 833 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 FGD4Q96M96 766 aa19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 SENP6Q9GZR1 1112 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
NOTCH3-205ENST00000600841 ASPRV1Q53RT3 343 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 NSMFQ6X4W1 530 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 CYB5R4Q7L1T6 521 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 ARMCX2Q7L311 632 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 RALYLQ86SE5 291 aaKnown RBP19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 XPNPEP3Q9NQH7 507 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 CYP39A1Q9NYL5 469 aa19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
NOTCH3-205ENST00000600841 RANBP2P49792 3224 aaKnown RBP19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 E7EWF7 191 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 PARP1P09874 1014 aaKnown RBP19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 ACVR2BQ13705 512 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 LRRC41Q15345 812 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 LRRC26Q2I0M4 334 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 CCDC144CPQ8IYA2 1237 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 ESYT1Q9BSJ8 1104 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 ABHD16BQ9H3Z7 469 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 FAM184BQ9ULE4 1060 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 RBM8AQ9Y5S9 174 aaKnown RBP19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 WDR19Q8NEZ3 1342 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 TRIOBPQ9H2D6 2365 aa19.68■□□□□ 0.74
NOTCH3-205ENST00000600841 ASB14A6NK59 587 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 SEC23AQ15436 765 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 HABP4Q5JVS0 413 aaKnown RBP19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 UBA5Q9GZZ9 404 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 CPVLQ9H3G5 476 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
NOTCH3-205ENST00000600841 ERICH2A1L162 156 aa19.66■□□□□ 0.74
NOTCH3-205ENST00000600841 SOWAHBA6NEL2 793 aa19.66■□□□□ 0.74
NOTCH3-205ENST00000600841 PGK1P00558 417 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms