RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 CCDC144BQ3MJ40 725 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 FAM83BQ5T0W9 1011 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 FGD4Q96M96 766 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 NECAB3Q96P71 396 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
COPE-210ENST00000600528 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 ABHD16BQ9H3Z7 469 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 SPC25Q9HBM1 224 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
COPE-210ENST00000600528 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 ZHX1Q9UKY1 873 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
COPE-210ENST00000600528 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 PRKAB2O43741 272 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 CYP2C18P33260 490 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 VWCEQ96DN2 955 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 SLF1Q9BQI6 1058 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 SEZ6LQ9BYH1 1024 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
COPE-210ENST00000600528 DCTPP1Q9H773 170 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
COPE-210ENST00000600528 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 USP17L21D6R901 530 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 ERC2O15083 957 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 AAK1Q2M2I8 961 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
COPE-210ENST00000600528 PRPF38AQ8NAV1 312 aaKnown RBP11.21□□□□□ -0.61
COPE-210ENST00000600528 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.61
COPE-210ENST00000600528 GRIN2DO15399 1336 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 UMODL1Q5DID0 1318 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 GOLIM4O00461 696 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 CABYRO75952 493 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 ADD2P35612 726 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 TFF2Q03403 129 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 ARMCX2Q7L311 632 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 OTOP2Q7RTS6 562 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 HIPK3Q9H422 1215 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 PPP4R2Q9NY27 417 aa11.2□□□□□ -0.62
COPE-210ENST00000600528 GNEQ9Y223 722 aaKnown RBP11.2□□□□□ -0.62
COPE-210ENST00000600528 ASTN1O14525 1302 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 F5H6K3 240 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 APBB1O00213 710 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 MBD4O95243 580 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 IGHDP01880 384 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 ATP5JP18859 108 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 KCNQ1P51787 676 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 RABGGTBP53611 331 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 OAZ1P54368 228 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
COPE-210ENST00000600528 KLRC3Q07444 240 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 ITGA7Q13683 1181 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 PPP2R2DQ66LE6 453 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 CXCL17Q6UXB2 119 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
COPE-210ENST00000600528 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
COPE-210ENST00000600528 NOC4LQ9BVI4 516 aaKnown RBP11.19□□□□□ -0.62
COPE-210ENST00000600528 WNT8AQ9H1J5 351 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 EPHX3Q9H6B9 360 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 MTCH2Q9Y6C9 303 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
COPE-210ENST00000600528 REV3LO60673 3130 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 TLL1O43897 1013 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 ZBED4O75132 1171 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 NDUFB10O96000 172 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 MYOGP15173 224 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 CCL23P55773 120 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 BEX3Q00994 111 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 TNFAIP2Q03169 654 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 UBE3CQ15386 1083 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 SLFNL1Q499Z3 407 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 CPXCR1Q8N123 301 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 FAM133AQ8N9E0 248 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 MKL1Q969V6 931 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 DNAJC2Q99543 621 aaKnown RBP11.18□□□□□ -0.62
COPE-210ENST00000600528 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.18□□□□□ -0.62
COPE-210ENST00000600528 COG5Q9UP83 839 aa11.18□□□□□ -0.62
COPE-210ENST00000600528 TCF20Q9UGU0 1960 aaKnown RBP11.17□□□□□ -0.62
COPE-210ENST00000600528 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms