RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.339e-7■■■■■ 27.5
ARHGEF1-220ENST00000600274 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
ARHGEF1-220ENST00000600274 RHBDL3P58872 404 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 KRT31Q15323 416 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 NID2Q14112 1375 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 POLRMTO00411 1230 aaKnown RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 TDP2O95551 362 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 CASQ1P31415 396 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 PDE4DQ08499 809 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 POTEMA6NI47 508 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 GDF11O95390 407 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 ZNF18P17022 549 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 ERCC5P28715 1186 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 PPP4CP60510 307 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 WDR24Q96S15 920 aa12.98□□□□□ -0.33
ARHGEF1-220ENST00000600274 OR52Z1P0C646 297 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 GNA11P29992 359 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 ARHGAP29Q52LW3 1261 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 MAGEC2Q9UBF1 373 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 PALM3A6NDB9 673 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 LONP1P36776 959 aaKnown RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 FXR1P51114 621 aaKnown RBP eCLIP12.97□□□□□ -0.336e-9■■■■□ 24.9
ARHGEF1-220ENST00000600274 PDXDC2PQ6P474 469 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 UBXN4Q92575 508 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 EXOC1Q9NV70 894 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 MYH6P13533 1939 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 FCER1AP12319 257 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 CHRNA5P30532 468 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 PMS1P54277 932 aaKnown RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 STIM1Q13586 685 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 USH1GQ495M9 461 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
ARHGEF1-220ENST00000600274 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 NR1I3Q14994 352 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 E2F4Q16254 413 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 NT5DC1Q5TFE4 455 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 POLD4Q9HCU8 107 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 PUF60Q9UHX1 559 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 SCAF8Q9UPN6 1271 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 SPATA31A6Q5VVP1 1343 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 DOCK2Q92608 1830 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 KIF2AO00139 706 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 PDHBP11177 359 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 KRT9P35527 623 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 MTIF2P46199 727 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 PROM2Q8N271 834 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 TFR2Q9UP52 801 aa12.96□□□□□ -0.33
ARHGEF1-220ENST00000600274 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ADRA2BP18089 450 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 COPB1P53618 953 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 LRRC41Q15345 812 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CALCRLQ16602 461 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 IRS2Q9Y4H2 1338 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L15C9J2P7 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L13C9JLJ4 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L11C9JVI0 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L18D6R9N7 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L22D6RA61 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L17D6RBQ6 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L19D6RCP7 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L20D6RJB6 530 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 CCP110O43303 1012 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 IL1R1P14778 569 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 ADCY7P51828 1080 aa12.95□□□□□ -0.34
ARHGEF1-220ENST00000600274 USP17L24Q0WX57 530 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms