RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 BMP3P12645 472 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 FOSL2P15408 326 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 GJA9P57773 515 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 CCDC174Q6PII3 467 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 ARMCX2Q7L311 632 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 LRRC47Q8N1G4 583 aaKnown RBP20.46■□□□□ 0.87
SMG9-210ENST00000600097 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 UPF3AQ9H1J1 476 aaKnown RBP20.46■□□□□ 0.87
SMG9-210ENST00000600097 TBX21Q9UL17 535 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
SMG9-210ENST00000600097 MYADML2A6NDP7 307 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 M0R2C6 588 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 ASGR1P07306 291 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 CDK7P50613 346 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 TSHZ3Q63HK5 1081 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 MFSD5Q6N075 450 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 VTI1AQ96AJ9 217 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 FGD4Q96M96 766 aa20.45■□□□□ 0.86
SMG9-210ENST00000600097 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
SMG9-210ENST00000600097 STAT2P52630 851 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 GNASQ5JWF2 1037 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 CHURC1Q8WUH1 139 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 ACAD9Q9H845 621 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
SMG9-210ENST00000600097 TMEM232C9JQI7 657 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 ARVCFO00192 962 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 ERC2O15083 957 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 ADCY6O43306 1168 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 DNAJB2P25686 324 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 NKX3-2P78367 333 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 PPIGQ13427 754 aaKnown RBP eCLIP20.43■□□□□ 0.864e-6■■□□□ 13.5
SMG9-210ENST00000600097 FAM160B2Q86V87 743 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 GMCL1Q96IK5 515 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 NAPBQ9H115 298 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 HOMER2Q9NSB8 354 aa20.43■□□□□ 0.86
SMG9-210ENST00000600097 ISY1Q9ULR0 285 aaKnown RBP20.43■□□□□ 0.86
SMG9-210ENST00000600097 TLR3O15455 904 aaKnown RBP20.42■□□□□ 0.86
SMG9-210ENST00000600097 TFAP4Q01664 338 aa20.42■□□□□ 0.86
SMG9-210ENST00000600097 TKFCQ3LXA3 575 aa20.42■□□□□ 0.86
SMG9-210ENST00000600097 TMEM199Q8N511 208 aa20.42■□□□□ 0.86
SMG9-210ENST00000600097 FAM133AQ8N9E0 248 aa20.42■□□□□ 0.86
SMG9-210ENST00000600097 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMG9-210ENST00000600097 ASB14A6NK59 587 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 PLA2G6O60733 806 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 SLC1A4P43007 532 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 IRX5P78411 483 aaPredicted RBP20.41■□□□□ 0.86
SMG9-210ENST00000600097 PPARAQ07869 468 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 IKQ13123 557 aaPredicted RBP20.41■□□□□ 0.86
SMG9-210ENST00000600097 STAG1Q8WVM7 1258 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 KATNBL1Q9H079 304 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
SMG9-210ENST00000600097 CNTN2Q02246 1040 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 GRIN2CQ14957 1233 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 FAM126BQ8IXS8 530 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 TIFAQ96CG3 184 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 FSD1Q9BTV5 496 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 ZNF576Q9H609 170 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 A1CFQ9NQ94 594 aaKnown RBP20.4■□□□□ 0.86
SMG9-210ENST00000600097 RNF146Q9NTX7 359 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 EYSQ5T1H1 3165 aa20.4■□□□□ 0.86
SMG9-210ENST00000600097 ZNF536O15090 1300 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 CTAGE5O15320 804 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 CABYRO75952 493 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 TMEM240Q5SV17 173 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 ZMYM1Q5SVZ6 1142 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 PSRC1Q6PGN9 363 aaPredicted RBP20.39■□□□□ 0.85
SMG9-210ENST00000600097 CCDC129Q6ZRS4 1044 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 NOL8Q76FK4 1167 aaKnown RBP20.39■□□□□ 0.85
SMG9-210ENST00000600097 SYMPKQ92797 1274 aaKnown RBP20.39■□□□□ 0.85
SMG9-210ENST00000600097 AGBL1Q96MI9 1066 aa20.39■□□□□ 0.85
SMG9-210ENST00000600097 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.85
SMG9-210ENST00000600097 PRUNE2Q8WUY3 3088 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 CSF2RAP15509 400 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 MCCP23508 829 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 RASIP1Q5U651 963 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 C16orf59Q7L2K0 433 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 PI4K2BQ8TCG2 481 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 TRERF1Q96PN7 1200 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 SEZ6LQ9BYH1 1024 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 STX8Q9UNK0 236 aa20.38■□□□□ 0.85
SMG9-210ENST00000600097 SOWAHBA6NEL2 793 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 CD4P01730 458 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 ALAS1P13196 640 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 RCSD1Q6JBY9 416 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 PPP1R12CQ9BZL4 782 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 AP5M1Q9H0R1 490 aa20.37■□□□□ 0.85
SMG9-210ENST00000600097 GNEQ9Y223 722 aaKnown RBP20.37■□□□□ 0.85
SMG9-210ENST00000600097 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.36■□□□□ 0.85
SMG9-210ENST00000600097 ZEB2O60315 1214 aa20.36■□□□□ 0.85
SMG9-210ENST00000600097 BEX3Q00994 111 aa20.36■□□□□ 0.85
SMG9-210ENST00000600097 ZNF365Q70YC5 407 aa20.36■□□□□ 0.85
SMG9-210ENST00000600097 TLK2Q86UE8 772 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms