RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
SIN3B-210ENST00000599880 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
SIN3B-210ENST00000599880 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
SIN3B-210ENST00000599880 NEDD4P46934 1319 aa12.86□□□□□ -0.35
SIN3B-210ENST00000599880 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 AKR1A1P14550 325 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 C7orf61Q8IZ16 206 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 RNF146Q9NTX7 359 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
SIN3B-210ENST00000599880 KBTBD13C9JR72 458 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 ICAM1P05362 532 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
SIN3B-210ENST00000599880 RARBP10826 455 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 PDHBP11177 359 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
SIN3B-210ENST00000599880 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
SIN3B-210ENST00000599880 CNNM2Q9H8M5 875 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 A1CFQ9NQ94 594 aaKnown RBP12.84□□□□□ -0.35
SIN3B-210ENST00000599880 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
SIN3B-210ENST00000599880 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
SIN3B-210ENST00000599880 SNAI1O95863 264 aaPredicted RBP12.83□□□□□ -0.36
SIN3B-210ENST00000599880 BMP8BP34820 402 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 FXR1P51114 621 aaKnown RBP eCLIP12.83□□□□□ -0.36
SIN3B-210ENST00000599880 LRRC41Q15345 812 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
SIN3B-210ENST00000599880 SYDE2Q5VT97 1194 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 FAM133AQ8N9E0 248 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 FGD4Q96M96 766 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 TRERF1Q96PN7 1200 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 GDF15Q99988 308 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 KRT23Q9C075 422 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 IL25Q9H293 177 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 XPNPEP3Q9NQH7 507 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 LAMA3Q16787 3333 aa12.83□□□□□ -0.36
SIN3B-210ENST00000599880 B4E1Z4 1266 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 KDM4AO75164 1064 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 ALAS1P13196 640 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
SIN3B-210ENST00000599880 CHMLP26374 656 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 ZNF543Q08ER8 600 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
SIN3B-210ENST00000599880 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 RNF180Q86T96 592 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
SIN3B-210ENST00000599880 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 WDR19Q8NEZ3 1342 aa12.82□□□□□ -0.36
SIN3B-210ENST00000599880 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 SNX17Q15036 470 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ENAHQ8N8S7 591 aaPredicted RBP12.81□□□□□ -0.36
SIN3B-210ENST00000599880 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 CHMP4CQ96CF2 233 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 CYP39A1Q9NYL5 469 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 FAM184BQ9ULE4 1060 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
SIN3B-210ENST00000599880 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 TNKSO95271 1327 aa12.81□□□□□ -0.36
SIN3B-210ENST00000599880 FRMPD2Q68DX3 1309 aaPredicted RBP12.81□□□□□ -0.36
SIN3B-210ENST00000599880 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 ASB14A6NK59 587 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 SGSM2O43147 1006 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 DUSP11O75319 330 aaKnown RBP12.8□□□□□ -0.36
SIN3B-210ENST00000599880 SLC16A2P36021 539 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 ACVR2BQ13705 512 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
SIN3B-210ENST00000599880 MUM1L1Q5H9M0 696 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
SIN3B-210ENST00000599880 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 KAT14Q9H8E8 782 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 ZHX1Q9UKY1 873 aaPredicted RBP12.8□□□□□ -0.36
SIN3B-210ENST00000599880 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
SIN3B-210ENST00000599880 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
SIN3B-210ENST00000599880 MOXD2PA6NHM9 499 aa12.79□□□□□ -0.36
SIN3B-210ENST00000599880 PGK1P00558 417 aa12.79□□□□□ -0.36
SIN3B-210ENST00000599880 SYN1P17600 705 aa12.79□□□□□ -0.36
SIN3B-210ENST00000599880 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms