RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 KIAA0355O15063 1070 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 TKFCQ3LXA3 575 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 ARMCX2Q7L311 632 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 KLHDC9Q8NEP7 349 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 STAG1Q8WVM7 1258 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 EVI5LQ96CN4 794 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 GLT1D1Q96MS3 346 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 HOMER2Q9NSB8 354 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 TMEM39AQ9NV64 488 aa17.32■□□□□ 0.36
EBI3-202ENST00000599339 MROH7Q68CQ1 1323 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 PLA2G6O60733 806 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 C6orf222P0C671 652 aaPredicted RBP17.31■□□□□ 0.36
EBI3-202ENST00000599339 CST5P28325 142 aaPredicted RBP17.31■□□□□ 0.36
EBI3-202ENST00000599339 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
EBI3-202ENST00000599339 KCNA10Q16322 511 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
EBI3-202ENST00000599339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
EBI3-202ENST00000599339 ELP1O95163 1332 aa17.3■□□□□ 0.36
EBI3-202ENST00000599339 MCCP23508 829 aa17.3■□□□□ 0.36
EBI3-202ENST00000599339 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
EBI3-202ENST00000599339 CCDC144BQ3MJ40 725 aa17.3■□□□□ 0.36
EBI3-202ENST00000599339 CCDC129Q6ZRS4 1044 aa17.3■□□□□ 0.36
EBI3-202ENST00000599339 FAM161BQ96MY7 647 aa17.3■□□□□ 0.36
EBI3-202ENST00000599339 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 ASB14A6NK59 587 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
EBI3-202ENST00000599339 GJA9P57773 515 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 FPGSQ05932 587 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
EBI3-202ENST00000599339 RCSD1Q6JBY9 416 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 VTI1AQ96AJ9 217 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
EBI3-202ENST00000599339 FGD4Q96M96 766 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 GUCD1Q96NT3 240 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 ANAPC4Q9UJX5 808 aa17.29■□□□□ 0.36
EBI3-202ENST00000599339 ASGR1P07306 291 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 ALAS1P13196 640 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 GNASQ5JWF2 1037 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 KCTD1Q719H9 257 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 AGBL1Q96MI9 1066 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 UPF3AQ9H1J1 476 aaKnown RBP17.28■□□□□ 0.36
EBI3-202ENST00000599339 A1CFQ9NQ94 594 aaKnown RBP17.28■□□□□ 0.36
EBI3-202ENST00000599339 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 MCM3APO60318 1980 aa17.28■□□□□ 0.36
EBI3-202ENST00000599339 CUL9Q8IWT3 2517 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 ZNF536O15090 1300 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 A0A0U1RQG5 324 aaPredicted RBP17.27■□□□□ 0.36
EBI3-202ENST00000599339 MYADML2A6NDP7 307 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 ORC4O43929 436 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 ITGB8P26012 769 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 CNTN2Q02246 1040 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 ALX1Q15699 326 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
EBI3-202ENST00000599339 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
EBI3-202ENST00000599339 FOXP2O15409 715 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
EBI3-202ENST00000599339 TIMP1P01033 207 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 PDE1AP54750 535 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
EBI3-202ENST00000599339 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 SEMA6BQ9H3T3 888 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 CCPG1Q9ULG6 757 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
EBI3-202ENST00000599339 LAMA2P24043 3122 aaKnown RBP17.26■□□□□ 0.35
EBI3-202ENST00000599339 TMEM265A0A087WTH1 108 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 ARVCFO00192 962 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 ADCY6O43306 1168 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 NMT2O60551 498 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 CABYRO75952 493 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 MCMDC2Q4G0Z9 681 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
EBI3-202ENST00000599339 KATNBL1Q9H079 304 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
EBI3-202ENST00000599339 A0A0C4DFX4 3053 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 ZEB2O60315 1214 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 ICAM1P05362 532 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 FGRP09769 529 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 NOVP48745 357 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 CDK7P50613 346 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 EPHB4P54760 987 aa17.24■□□□□ 0.35
EBI3-202ENST00000599339 NKX3-2P78367 333 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms