RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TAL1P17542 331 aaPredicted RBP27.11■■□□□ 1.93
SSBP4-205ENST00000598159 PDE4AP27815 886 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 BMP8BP34820 402 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 CCDC96Q2M329 555 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 BTNL9Q6UXG8 535 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 TBC1D10CQ8IV04 446 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 AGBL1Q96MI9 1066 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 GDF15Q99988 308 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 CTNNA3Q9UI47 895 aa27.11■■□□□ 1.93
SSBP4-205ENST00000598159 SNAI1O95863 264 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-205ENST00000598159 AKR1A1P14550 325 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 SYN1P17600 705 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 LRRC41Q15345 812 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 TTC22Q5TAA0 569 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 TRERF1Q96PN7 1200 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 XPNPEP3Q9NQH7 507 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 HOMER2Q9NSB8 354 aa27.1■■□□□ 1.93
SSBP4-205ENST00000598159 MYCNP04198 464 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-205ENST00000598159 CCDC178Q5BJE1 867 aa27.09■■□□□ 1.93
SSBP4-205ENST00000598159 RNF146Q9NTX7 359 aa27.09■■□□□ 1.93
SSBP4-205ENST00000598159 FAM184BQ9ULE4 1060 aa27.09■■□□□ 1.93
SSBP4-205ENST00000598159 TRIOBPQ9H2D6 2365 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 ALAS1P13196 640 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 ATN1P54259 1190 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-205ENST00000598159 IMMTQ16891 758 aaKnown RBP27.08■■□□□ 1.93
SSBP4-205ENST00000598159 CCDC174Q6PII3 467 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 SLC39A5Q6ZMH5 540 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 RNF180Q86T96 592 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 DGKHQ86XP1 1220 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 PCDH10Q9P2E7 1040 aa27.08■■□□□ 1.93
SSBP4-205ENST00000598159 POTEB2H3BUK9 544 aa27.07■■□□□ 1.92
SSBP4-205ENST00000598159 TTBK2Q6IQ55 1244 aa27.07■■□□□ 1.92
SSBP4-205ENST00000598159 RASGRP2Q7LDG7 609 aa27.07■■□□□ 1.92
SSBP4-205ENST00000598159 IQCA1Q86XH1 822 aa27.07■■□□□ 1.92
SSBP4-205ENST00000598159 ABHD16BQ9H3Z7 469 aa27.07■■□□□ 1.92
SSBP4-205ENST00000598159 ICAM1P05362 532 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 PDHBP11177 359 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 GSPT1P15170 499 aaKnown RBP27.06■■□□□ 1.92
SSBP4-205ENST00000598159 SLC16A2P36021 539 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 ADCYAP1R1P41586 468 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 SNAP25P60880 206 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 ACVR2BQ13705 512 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 SYDE2Q5VT97 1194 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 FAM133AQ8N9E0 248 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 RANBP17Q9H2T7 1088 aaKnown RBP27.06■■□□□ 1.92
SSBP4-205ENST00000598159 GPCPD1Q9NPB8 672 aa27.06■■□□□ 1.92
SSBP4-205ENST00000598159 A1CFQ9NQ94 594 aaKnown RBP27.06■■□□□ 1.92
SSBP4-205ENST00000598159 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-205ENST00000598159 RUFY2Q8WXA3 655 aa27.05■■□□□ 1.92
SSBP4-205ENST00000598159 FGD4Q96M96 766 aa27.05■■□□□ 1.92
SSBP4-205ENST00000598159 PNMA2Q9UL42 364 aa27.05■■□□□ 1.92
SSBP4-205ENST00000598159 CCPG1Q9ULG6 757 aa27.05■■□□□ 1.92
SSBP4-205ENST00000598159 NEDD4P46934 1319 aa27.05■■□□□ 1.92
SSBP4-205ENST00000598159 PGK1P00558 417 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 MAGEA10P43363 369 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-205ENST00000598159 RTP1P59025 263 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 CNTN2Q02246 1040 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 ARMCX2Q7L311 632 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 ZKSCAN3Q9BRR0 538 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 ZHX1Q9UKY1 873 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-205ENST00000598159 PHF24Q9UPV7 400 aa27.04■■□□□ 1.92
SSBP4-205ENST00000598159 FRMPD2Q68DX3 1309 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-205ENST00000598159 ASB14A6NK59 587 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 KDM4AO75164 1064 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 SNHG28P0DPA3 235 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 ZNF543Q08ER8 600 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 C1orf53Q5VUE5 145 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 ANKS1AQ92625 1134 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 TSEN34Q9BSV6 310 aaKnown RBP27.03■■□□□ 1.92
SSBP4-205ENST00000598159 KRT23Q9C075 422 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 CNNM2Q9H8M5 875 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 ZSWIM5Q9P217 1185 aa27.03■■□□□ 1.92
SSBP4-205ENST00000598159 RAD50Q92878 1312 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 DUSP11O75319 330 aaKnown RBP27.02■■□□□ 1.92
SSBP4-205ENST00000598159 SNX17Q15036 470 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 MUM1L1Q5H9M0 696 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 GPATCH4Q5T3I0 446 aaKnown RBP27.02■■□□□ 1.92
SSBP4-205ENST00000598159 CCDC144CPQ8IYA2 1237 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 FERMT2Q96AC1 680 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 CYP39A1Q9NYL5 469 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 PRKAG2Q9UGJ0 569 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 LAMA4Q16363 1823 aa27.02■■□□□ 1.92
SSBP4-205ENST00000598159 MCM3APO60318 1980 aa27.01■■□□□ 1.91
SSBP4-205ENST00000598159 B4E1Z4 1266 aa27.01■■□□□ 1.91
SSBP4-205ENST00000598159 ADAMTS4O75173 837 aa27.01■■□□□ 1.91
SSBP4-205ENST00000598159 ZSCAN10Q96SZ4 725 aaPredicted RBP27.01■■□□□ 1.91
SSBP4-205ENST00000598159 ATP11BQ9Y2G3 1177 aa27.01■■□□□ 1.91
SSBP4-205ENST00000598159 SOWAHBA6NEL2 793 aa27■■□□□ 1.91
SSBP4-205ENST00000598159 CCDC144BQ3MJ40 725 aa27■■□□□ 1.91
SSBP4-205ENST00000598159 UBE2OQ9C0C9 1292 aaKnown RBP27■■□□□ 1.91
SSBP4-205ENST00000598159 IL25Q9H293 177 aa27■■□□□ 1.91
SSBP4-205ENST00000598159 CHMLP26374 656 aa26.99■■□□□ 1.91
SSBP4-205ENST00000598159 NSMFQ6X4W1 530 aa26.99■■□□□ 1.91
SSBP4-205ENST00000598159 KLHDC9Q8NEP7 349 aa26.99■■□□□ 1.91
SSBP4-205ENST00000598159 LBHD1Q9BQE6 289 aaPredicted RBP26.99■■□□□ 1.91
SSBP4-205ENST00000598159 KAT14Q9H8E8 782 aa26.99■■□□□ 1.91
SSBP4-205ENST00000598159 PNMA1Q8ND90 353 aa26.98■■□□□ 1.91
SSBP4-205ENST00000598159 LENG1Q96BZ8 264 aaPredicted RBP26.98■■□□□ 1.91
SSBP4-205ENST00000598159 KATNBL1Q9H079 304 aa26.98■■□□□ 1.91
SSBP4-205ENST00000598159 SPC25Q9HBM1 224 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms