RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SNX17Q15036 470 aa20.15■□□□□ 0.82
CCDC9-202ENST00000595659 MSL3Q8N5Y2 521 aaKnown RBP20.15■□□□□ 0.82
CCDC9-202ENST00000595659 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.15■□□□□ 0.82
CCDC9-202ENST00000595659 FBXO40Q9UH90 709 aa20.15■□□□□ 0.82
CCDC9-202ENST00000595659 FAM184BQ9ULE4 1060 aa20.15■□□□□ 0.82
CCDC9-202ENST00000595659 SYNGAP1Q96PV0 1343 aa20.15■□□□□ 0.82
CCDC9-202ENST00000595659 LAMA3Q16787 3333 aa20.14■□□□□ 0.82
CCDC9-202ENST00000595659 FRMPD3Q5JV73 1810 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 A0A1W2PQ45 241 aaPredicted RBP20.14■□□□□ 0.81
CCDC9-202ENST00000595659 A0A1W2PQY0 241 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 ORC4O43929 436 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 ALAS1P13196 640 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 ACVR2BQ13705 512 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 CCDC96Q2M329 555 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 PPP4R3BQ5MIZ7 849 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 TTBK2Q6IQ55 1244 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 CHD1LQ86WJ1 897 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 RNF146Q9NTX7 359 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 PRR12Q9ULL5 1215 aa20.14■□□□□ 0.81
CCDC9-202ENST00000595659 DDX49Q9Y6V7 483 aaKnown RBP20.14■□□□□ 0.81
CCDC9-202ENST00000595659 SYNRGQ9UMZ2 1314 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 TRIM43BA6NCK2 446 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 MYADML2A6NDP7 307 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 POTEB2H3BUK9 544 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 ADCY6O43306 1168 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 FGRP09769 529 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 FDX1P10109 184 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 SLC16A2P36021 539 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC9-202ENST00000595659 ARMCX2Q7L311 632 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 ZNF467Q7Z7K2 595 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-202ENST00000595659 PLEKHM2Q8IWE5 1019 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 CCDC144CPQ8IYA2 1237 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 DEFB123Q8N688 67 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 BADQ92934 168 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 TRIM43Q96BQ3 446 aaPredicted RBP20.13■□□□□ 0.81
CCDC9-202ENST00000595659 TRERF1Q96PN7 1200 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 ACAD9Q9H845 621 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 PDLIM7Q9NR12 457 aa20.13■□□□□ 0.81
CCDC9-202ENST00000595659 CCDC171Q6TFL3 1326 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 PQBP1O60828 265 aaKnown RBP20.12■□□□□ 0.81
CCDC9-202ENST00000595659 SDSP20132 328 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 NUCB1Q02818 461 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 AAMPQ13685 434 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 CCDC144BQ3MJ40 725 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 MUM1L1Q5H9M0 696 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 TMEM47Q9BQJ4 181 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 GPCPD1Q9NPB8 672 aa20.12■□□□□ 0.81
CCDC9-202ENST00000595659 A1CFQ9NQ94 594 aaKnown RBP20.12■□□□□ 0.81
CCDC9-202ENST00000595659 FRMPD2Q68DX3 1309 aaPredicted RBP20.11■□□□□ 0.81
CCDC9-202ENST00000595659 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 PLA2G6O60733 806 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 NOVP48745 357 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 ACLYP53396 1101 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 KCNA10Q16322 511 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 FAM133AQ8N9E0 248 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 PURBQ96QR8 312 aaKnown RBP20.11■□□□□ 0.81
CCDC9-202ENST00000595659 ABHD16BQ9H3Z7 469 aa20.11■□□□□ 0.81
CCDC9-202ENST00000595659 DUSP11O75319 330 aaKnown RBP20.1■□□□□ 0.81
CCDC9-202ENST00000595659 C1orf53Q5VUE5 145 aa20.1■□□□□ 0.81
CCDC9-202ENST00000595659 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
CCDC9-202ENST00000595659 TBC1D10CQ8IV04 446 aa20.1■□□□□ 0.81
CCDC9-202ENST00000595659 KLHDC9Q8NEP7 349 aa20.1■□□□□ 0.81
CCDC9-202ENST00000595659 DCAF4Q8WV16 495 aa20.1■□□□□ 0.81
CCDC9-202ENST00000595659 CCPG1Q9ULG6 757 aa20.1■□□□□ 0.81
CCDC9-202ENST00000595659 C6orf222P0C671 652 aaPredicted RBP20.09■□□□□ 0.81
CCDC9-202ENST00000595659 TOP1P11387 765 aaKnown RBP20.09■□□□□ 0.81
CCDC9-202ENST00000595659 ITGB8P26012 769 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 SHHQ15465 462 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 TKFCQ3LXA3 575 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 C9orf50Q5SZB4 431 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 MFSD6Q6ZSS7 791 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 TSEN34Q9BSV6 310 aaKnown RBP20.09■□□□□ 0.81
CCDC9-202ENST00000595659 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
CCDC9-202ENST00000595659 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.08■□□□□ 0.81
CCDC9-202ENST00000595659 CLTBP09497 229 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 PTGS1P23219 599 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 AKNAD1Q5T1N1 836 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 SYDE2Q5VT97 1194 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
CCDC9-202ENST00000595659 NSMFQ6X4W1 530 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 NOL8Q76FK4 1167 aaKnown RBP20.08■□□□□ 0.81
CCDC9-202ENST00000595659 VTI1AQ96AJ9 217 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 ZKSCAN3Q9BRR0 538 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 KATNBL1Q9H079 304 aa20.08■□□□□ 0.81
CCDC9-202ENST00000595659 MYH4Q9Y623 1939 aa20.08■□□□□ 0.8
CCDC9-202ENST00000595659 ASTN1O14525 1302 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 GNASQ5JWF2 1037 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 GPR153Q6NV75 609 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 TICAM2Q86XR7 235 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 RANBP17Q9H2T7 1088 aaKnown RBP20.07■□□□□ 0.8
CCDC9-202ENST00000595659 OSBPL3Q9H4L5 887 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 DIAPH3Q9NSV4 1193 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 TCP11L1Q9NUJ3 509 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 TMEM39AQ9NV64 488 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 MTMR10Q9NXD2 777 aa20.07■□□□□ 0.8
CCDC9-202ENST00000595659 ZNFX1Q9P2E3 1918 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms