RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 GMCL1Q96IK5 515 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 NACAP1Q9BZK3 213 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 ABHD16BQ9H3Z7 469 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 STARD7Q9NQZ5 370 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 TMEM39AQ9NV64 488 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 ZNF536O15090 1300 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 ELP1O95163 1332 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 VCANP13611 3396 aa18.93■□□□□ 0.62
GTF2F1-203ENST00000594213 ERC2O15083 957 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 CTAGE5O15320 804 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 PLA2G6O60733 806 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 TSPY3P0CV98 308 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 TSPY8P0CW00 308 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 RAG1P15918 1043 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 GJA9P57773 515 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 PDE4BQ07343 736 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 PPARAQ07869 468 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 FAM133AQ8N9E0 248 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 TBX21Q9UL17 535 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 CTDP1Q9Y5B0 961 aaPredicted RBP18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
GTF2F1-203ENST00000594213 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 CCDC144BQ3MJ40 725 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 STAG1Q8WVM7 1258 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 NAPBQ9H115 298 aa18.91■□□□□ 0.62
GTF2F1-203ENST00000594213 TIMP1P01033 207 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 NOVP48745 357 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 FPGSQ05932 587 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 CHURC1Q8WUH1 139 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 RNPC3Q96LT9 517 aaKnown RBP18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 FSD1Q9BTV5 496 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 COL25A1Q9BXS0 654 aaPredicted RBP18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 IL17RBQ9NRM6 502 aa18.9■□□□□ 0.62
GTF2F1-203ENST00000594213 PLXNA1Q9UIW2 1896 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 SOWAHBA6NEL2 793 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 ASGR1P07306 291 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 SLC3A2P08195 630 aaKnown RBP18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 MCCP23508 829 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 STAT2P52630 851 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 PCSK9Q8NBP7 692 aaKnown RBP18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 GLT1D1Q96MS3 346 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 ACAD9Q9H845 621 aa18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
GTF2F1-203ENST00000594213 TMEM265A0A087WTH1 108 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 ARVCFO00192 962 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 C6orf222P0C671 652 aaPredicted RBP18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 MX1P20591 662 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 SLC1A4P43007 532 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 TKFCQ3LXA3 575 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 RCSD1Q6JBY9 416 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 CCDC129Q6ZRS4 1044 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 C16orf59Q7L2K0 433 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 RNF146Q9NTX7 359 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 ANAPC4Q9UJX5 808 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 ASTN1O14525 1302 aa18.88■□□□□ 0.61
GTF2F1-203ENST00000594213 FGRP09769 529 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 CTDSPL2Q05D32 466 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 GNASQ5JWF2 1037 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 MFSD5Q6N075 450 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 SLC43A3Q8NBI5 491 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 SPC25Q9HBM1 224 aa18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 GNEQ9Y223 722 aaKnown RBP18.87■□□□□ 0.61
GTF2F1-203ENST00000594213 MROH7Q68CQ1 1323 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 A0A0U1RQG5 324 aaPredicted RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 NMT2O60551 498 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 ALX1Q15699 326 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 RASIP1Q5U651 963 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 KCTD1Q719H9 257 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 FAM126BQ8IXS8 530 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.86■□□□□ 0.613e-8■■■■■ 30.2
GTF2F1-203ENST00000594213 PRR12Q9ULL5 1215 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 TTC28Q96AY4 2481 aa18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 SPTBN5Q9NRC6 3674 aaKnown RBP18.86■□□□□ 0.61
GTF2F1-203ENST00000594213 ASB14A6NK59 587 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 ORC4O43929 436 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 CD4P01730 458 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 TNFAIP2Q03169 654 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 TMEM240Q5SV17 173 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 RASGRP2Q7LDG7 609 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 STX8Q9UNK0 236 aa18.85■□□□□ 0.61
GTF2F1-203ENST00000594213 TSPY2A6NKD2 308 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 SNAP25P60880 206 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms