RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SPTLC2O15270 562 aa23.83■■□□□ 1.41
PNKP-203ENST00000593946 VGLL4Q14135 290 aa23.83■■□□□ 1.41
PNKP-203ENST00000593946 PCDHA6Q9UN73 950 aa23.83■■□□□ 1.41
PNKP-203ENST00000593946 PCDHA8Q9Y5H6 950 aa23.83■■□□□ 1.41
PNKP-203ENST00000593946 ZHX2Q9Y6X8 837 aa23.83■■□□□ 1.41
PNKP-203ENST00000593946 POTEIP0CG38 1075 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 POTEJP0CG39 1038 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 IREB2P48200 963 aaKnown RBP23.82■■□□□ 1.4
PNKP-203ENST00000593946 PIK3AP1Q6ZUJ8 805 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 BICD2Q8TD16 824 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 RASGRP4Q8TDF6 673 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 EMILIN3Q9NT22 766 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 NOL7Q9UMY1 257 aaKnown RBP23.82■■□□□ 1.4
PNKP-203ENST00000593946 RLFQ13129 1914 aa23.82■■□□□ 1.4
PNKP-203ENST00000593946 TRAPPC10P48553 1259 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 AMNQ9BXJ7 453 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 PCDHB6Q9Y5E3 794 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 GOLGA6L4A6NEF3 574 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 VCAM1P19320 739 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 ME1P48163 572 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 ADCY7P51828 1080 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 SNAP25P60880 206 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 DGKZQ13574 1117 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 C12orf42Q96LP6 360 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 RIC8AQ9NPQ8 531 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 FBXO28Q9NVF7 368 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 PCDHA1Q9Y5I3 950 aa23.81■■□□□ 1.4
PNKP-203ENST00000593946 TRIM75PA6NK02 468 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 MAP3K11Q16584 847 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 FBXO11Q86XK2 927 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 REXO1Q8N1G1 1221 aaKnown RBP23.8■■□□□ 1.4
PNKP-203ENST00000593946 RANBP17Q9H2T7 1088 aaKnown RBP23.8■■□□□ 1.4
PNKP-203ENST00000593946 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.8■■□□□ 1.4
PNKP-203ENST00000593946 PCDHA7Q9UN72 937 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 AFG3L2Q9Y4W6 797 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 CSADQ9Y600 493 aa23.8■■□□□ 1.4
PNKP-203ENST00000593946 CCDC194A0A1B0GVG4 234 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 C19orf81C9J6K1 198 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 PPP6R2O75170 966 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
PNKP-203ENST00000593946 KIFC2Q96AC6 838 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 CLEC11AQ9Y240 323 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 KRT25Q7Z3Z0 450 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 GZF1Q9H116 711 aaPredicted RBP23.79■■□□□ 1.4
PNKP-203ENST00000593946 RRAGCQ9HB90 399 aa23.79■■□□□ 1.4
PNKP-203ENST00000593946 MORC2Q9Y6X9 1032 aaPredicted RBP23.79■■□□□ 1.4
PNKP-203ENST00000593946 MYH7BA7E2Y1 1941 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 WNT7AO00755 349 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 TTC38Q5R3I4 469 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 JMYQ8N9B5 988 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 CUL5Q93034 780 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 SLF1Q9BQI6 1058 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 TMEM63CQ9P1W3 806 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 CEP131Q9UPN4 1083 aa23.78■■□□□ 1.4
PNKP-203ENST00000593946 LOC285556D6RIA3 1793 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 ATP2B1P20020 1258 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 CLK2P49760 499 aaKnown RBP23.77■■□□□ 1.4
PNKP-203ENST00000593946 HMGCS2P54868 508 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 MAP1SQ66K74 1059 aaPredicted RBP23.77■■□□□ 1.4
PNKP-203ENST00000593946 ANKRD13AQ8IZ07 590 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 PRPF38AQ8NAV1 312 aaKnown RBP23.77■■□□□ 1.4
PNKP-203ENST00000593946 GLT8D2Q9H1C3 349 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 RPAP3Q9H6T3 665 aaPredicted RBP23.77■■□□□ 1.4
PNKP-203ENST00000593946 PSTPIP2Q9H939 334 aa23.77■■□□□ 1.4
PNKP-203ENST00000593946 COL11A1P12107 1806 aaPredicted RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 DCAF8L1A6NGE4 600 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 MARCKSP29966 332 aaPredicted RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 MRPL12P52815 198 aaKnown RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 TRAF1Q13077 416 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 AXDND1Q5T1B0 1012 aaPredicted RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 TANGO6Q9C0B7 1094 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 BIN2Q9UBW5 565 aaPredicted RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 A0A1W2PQ27 194 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 A0A1W2PQ64 194 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 A0A1W2PQD8 194 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 BMP15O95972 392 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 NONOQ15233 471 aaKnown RBP eCLIP23.76■■□□□ 1.39
PNKP-203ENST00000593946 USH1GQ495M9 461 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 SH3D19Q5HYK7 790 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 MOB2Q70IA6 237 aa23.76■■□□□ 1.39
PNKP-203ENST00000593946 RBM46Q8TBY0 533 aaKnown RBP23.76■■□□□ 1.39
PNKP-203ENST00000593946 LIG1P18858 919 aa23.75■■□□□ 1.39
PNKP-203ENST00000593946 TTLL12Q14166 644 aaPredicted RBP23.75■■□□□ 1.39
PNKP-203ENST00000593946 INF2Q27J81 1249 aa23.75■■□□□ 1.39
PNKP-203ENST00000593946 TMEM260Q9NX78 707 aa23.75■■□□□ 1.39
PNKP-203ENST00000593946 JAKMIP3Q5VZ66 844 aa23.74■■□□□ 1.39
PNKP-203ENST00000593946 ARMC9Q7Z3E5 817 aa23.74■■□□□ 1.39
PNKP-203ENST00000593946 LDHDQ86WU2 507 aa23.74■■□□□ 1.39
PNKP-203ENST00000593946 SYAP1Q96A49 352 aaPredicted RBP23.74■■□□□ 1.39
PNKP-203ENST00000593946 CLMNQ96JQ2 1002 aa23.74■■□□□ 1.39
PNKP-203ENST00000593946 PPP1R9AQ9ULJ8 1098 aa23.74■■□□□ 1.39
PNKP-203ENST00000593946 FLOT1O75955 427 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 ZNF174Q15697 407 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 UBE2SQ16763 222 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 CCDC174Q6PII3 467 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 ERO1BQ86YB8 467 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 CNKSR2Q8WXI2 1034 aa23.73■■□□□ 1.39
PNKP-203ENST00000593946 ELP3Q9H9T3 547 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms