RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ESPNB1AK53 854 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 TOB1P50616 345 aaPredicted RBP15.14■□□□□ 0.01
VRK3-205ENST00000593919 MTMR2Q13614 643 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 QRICH1Q2TAL8 776 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 NOL9Q5SY16 702 aaKnown RBP15.14■□□□□ 0.01
VRK3-205ENST00000593919 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 DAGLBQ8NCG7 672 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 CDCA5Q96FF9 252 aa15.14■□□□□ 0.01
VRK3-205ENST00000593919 M0R2N6 131 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
VRK3-205ENST00000593919 SPP2Q13103 211 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 DGKZQ13574 1117 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 SF3A1Q15459 793 aaKnown RBP15.13■□□□□ 0.01
VRK3-205ENST00000593919 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 RASGRP4Q8TDF6 673 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 WDR18Q9BV38 432 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 YEATS4O95619 227 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 SNAP25P60880 206 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 VGLL4Q14135 290 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 STK38Q15208 465 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
VRK3-205ENST00000593919 ZNF280CQ8ND82 737 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 LPAR1Q92633 364 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 PGBD1Q96JS3 809 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 PRR12Q9ULL5 1215 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 ZHX2Q9Y6X8 837 aa15.13■□□□□ 0.01
VRK3-205ENST00000593919 ESYT2A0FGR8 921 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 GOLGA6L4A6NEF3 574 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 GNA11P29992 359 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 NF2P35240 595 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 C6orf50Q9HD87 102 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
VRK3-205ENST00000593919 TRIM75PA6NK02 468 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
VRK3-205ENST00000593919 LIG1P18858 919 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 BACE1P56817 501 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PPP1R18Q6NYC8 613 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 CHURC1Q8WUH1 139 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PDLIM2Q96JY6 352 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 FBXO28Q9NVF7 368 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PCDHA6Q9UN73 950 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PCDHB6Q9Y5E3 794 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PCDHA8Q9Y5H6 950 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 SPTLC2O15270 562 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PLA2G6O60733 806 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 VCAM1P19320 739 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 ME1P48163 572 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 USP14P54578 494 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 PTPAQ15257 358 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 FAM160B2Q86V87 743 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 KCNG4Q8TDN1 519 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
VRK3-205ENST00000593919 MYH7BA7E2Y1 1941 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 RLFQ13129 1914 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 ATP2B1P20020 1258 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
VRK3-205ENST00000593919 ADCY7P51828 1080 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 MAP1SQ66K74 1059 aaPredicted RBP15.1■□□□□ 0.01
VRK3-205ENST00000593919 AMNQ9BXJ7 453 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 RRAGCQ9HB90 399 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 PCDHA7Q9UN72 937 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
VRK3-205ENST00000593919 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 WNT7AO00755 349 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 MOB2Q70IA6 237 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 REXO1Q8N1G1 1221 aaKnown RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 NOL7Q9UMY1 257 aaKnown RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 AFG3L2Q9Y4W6 797 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 CSADQ9Y600 493 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 CLCN1P35523 988 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 HMGCS2P54868 508 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 USH1GQ495M9 461 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 RANBP17Q9H2T7 1088 aaKnown RBP15.09■□□□□ 0.01
VRK3-205ENST00000593919 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
VRK3-205ENST00000593919 TAL1P17542 331 aaPredicted RBP15.08■□□□□ 0
VRK3-205ENST00000593919 TRAPPC10P48553 1259 aa15.08■□□□□ 0
VRK3-205ENST00000593919 TTLL12Q14166 644 aaPredicted RBP15.08■□□□□ 0
VRK3-205ENST00000593919 TTC38Q5R3I4 469 aa15.08■□□□□ 0
VRK3-205ENST00000593919 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
VRK3-205ENST00000593919 FUCA2Q9BTY2 467 aa15.08■□□□□ 0
VRK3-205ENST00000593919 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
VRK3-205ENST00000593919 RPAP3Q9H6T3 665 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms