RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SH3RF1Q7Z6J0 888 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 MSL3Q8N5Y2 521 aaKnown RBP21.22■□□□□ 0.99
CIRBP-243ENST00000593128 ACAD9Q9H845 621 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 PDLIM7Q9NR12 457 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 IL17RBQ9NRM6 502 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 RNF146Q9NTX7 359 aa21.22■□□□□ 0.99
CIRBP-243ENST00000593128 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-243ENST00000593128 POTEB2H3BUK9 544 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 HAND2P61296 217 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 CNTN2Q02246 1040 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 NMIQ13287 307 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-243ENST00000593128 ACVR2BQ13705 512 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 SNX17Q15036 470 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 TACC3Q9Y6A5 838 aa21.21■□□□□ 0.99
CIRBP-243ENST00000593128 TRIM43BA6NCK2 446 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 C6orf222P0C671 652 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-243ENST00000593128 FDX1P10109 184 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 MAMDC4Q6UXC1 1216 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.98
CIRBP-243ENST00000593128 ARMCX2Q7L311 632 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 ZNF467Q7Z7K2 595 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-243ENST00000593128 SLC17A8Q8NDX2 589 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 TRIM43Q96BQ3 446 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-243ENST00000593128 TRERF1Q96PN7 1200 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-243ENST00000593128 STARD7Q9NQZ5 370 aa21.2■□□□□ 0.98
CIRBP-243ENST00000593128 ADAMTS4O75173 837 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 FGAP02671 866 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 CLTBP09497 229 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 ACLYP53396 1101 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 KCNA10Q16322 511 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 CCDC144BQ3MJ40 725 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 GPR153Q6NV75 609 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 CCDC144CPQ8IYA2 1237 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 FAM161BQ96MY7 647 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 SPC25Q9HBM1 224 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 ANAPC4Q9UJX5 808 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 PRR12Q9ULL5 1215 aa21.19■□□□□ 0.98
CIRBP-243ENST00000593128 MYADML2A6NDP7 307 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 SLC16A2P36021 539 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 IRX5P78411 483 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-243ENST00000593128 SHHQ15465 462 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 ZNF589Q86UQ0 364 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-243ENST00000593128 NUP133Q8WUM0 1156 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 FGD4Q96M96 766 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 ABHD16BQ9H3Z7 469 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 A1CFQ9NQ94 594 aaKnown RBP21.18■□□□□ 0.98
CIRBP-243ENST00000593128 CCPG1Q9ULG6 757 aa21.18■□□□□ 0.98
CIRBP-243ENST00000593128 FRMPD2Q68DX3 1309 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-243ENST00000593128 ORC4O43929 436 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 DUSP11O75319 330 aaKnown RBP21.17■□□□□ 0.98
CIRBP-243ENST00000593128 HSPD1P10809 573 aaKnown RBP21.17■□□□□ 0.98
CIRBP-243ENST00000593128 ALX1Q15699 326 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 C9orf50Q5SZB4 431 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 TTBK2Q6IQ55 1244 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 TSEN34Q9BSV6 310 aaKnown RBP21.17■□□□□ 0.98
CIRBP-243ENST00000593128 GPCPD1Q9NPB8 672 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 TMEM39AQ9NV64 488 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 ZNF536O15090 1300 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 CCDC171Q6TFL3 1326 aa21.17■□□□□ 0.98
CIRBP-243ENST00000593128 ADCY6O43306 1168 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 RAG1P15918 1043 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 MUM1L1Q5H9M0 696 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 C1orf53Q5VUE5 145 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 NSMFQ6X4W1 530 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 DCAF4Q8WV16 495 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 MTMR10Q9NXD2 777 aa21.16■□□□□ 0.98
CIRBP-243ENST00000593128 DDX49Q9Y6V7 483 aaKnown RBP21.16■□□□□ 0.98
CIRBP-243ENST00000593128 SOWAHBA6NEL2 793 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 MOXD2PA6NHM9 499 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 GNASQ5JWF2 1037 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.15■□□□□ 0.98
CIRBP-243ENST00000593128 EEPD1Q7L9B9 569 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 CHD1LQ86WJ1 897 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 KLHDC9Q8NEP7 349 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 EXOC6Q8TAG9 804 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 GLT1D1Q96MS3 346 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 TMEM47Q9BQJ4 181 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 COL6A3P12111 3177 aa21.15■□□□□ 0.98
CIRBP-243ENST00000593128 DCDC2CA8MYV0 355 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 PLA2G6O60733 806 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 IGHDP01880 384 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 ASGR1P07306 291 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 TOP1P11387 765 aaKnown RBP21.14■□□□□ 0.97
CIRBP-243ENST00000593128 SDSP20132 328 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 ITGB8P26012 769 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 MFSD6Q6ZSS7 791 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 FAM133AQ8N9E0 248 aa21.14■□□□□ 0.97
CIRBP-243ENST00000593128 PCSK9Q8NBP7 692 aaKnown RBP21.14■□□□□ 0.97
CIRBP-243ENST00000593128 LAMA2P24043 3122 aaKnown RBP21.13■□□□□ 0.97
CIRBP-243ENST00000593128 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-243ENST00000593128 ASB14A6NK59 587 aa21.13■□□□□ 0.97
CIRBP-243ENST00000593128 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
CIRBP-243ENST00000593128 BEX3Q00994 111 aa21.13■□□□□ 0.97
CIRBP-243ENST00000593128 TNFAIP2Q03169 654 aa21.13■□□□□ 0.97
CIRBP-243ENST00000593128 SYDE2Q5VT97 1194 aa21.13■□□□□ 0.97
CIRBP-243ENST00000593128 SMC5Q8IY18 1101 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms