RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MCM3APO60318 1980 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 DUSP11O75319 330 aaKnown RBP15.69■□□□□ 0.1
APOC1-209ENST00000592885 PGK1P00558 417 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 MCCP23508 829 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 CST5P28325 142 aaPredicted RBP15.69■□□□□ 0.1
APOC1-209ENST00000592885 FAM227BQ96M60 508 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 FGD4Q96M96 766 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 LNPKQ9C0E8 428 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 OSBPL3Q9H4L5 887 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 PDLIM7Q9NR12 457 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 RNF146Q9NTX7 359 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 TCP11L1Q9NUJ3 509 aa15.69■□□□□ 0.1
APOC1-209ENST00000592885 ZHX1Q9UKY1 873 aaPredicted RBP15.69■□□□□ 0.1
APOC1-209ENST00000592885 ZNF536O15090 1300 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 A0A1W2PQ45 241 aaPredicted RBP15.68■□□□□ 0.1
APOC1-209ENST00000592885 A0A1W2PQY0 241 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 FGAP02671 866 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 HSPD1P10809 573 aaKnown RBP15.68■□□□□ 0.1
APOC1-209ENST00000592885 SLC4A3P48751 1232 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 NMIQ13287 307 aaPredicted RBP15.68■□□□□ 0.1
APOC1-209ENST00000592885 ACVR2BQ13705 512 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 ARMCX2Q7L311 632 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 FAM133AQ8N9E0 248 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 KLHDC9Q8NEP7 349 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 NUP133Q8WUM0 1156 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
APOC1-209ENST00000592885 PRDM5Q9NQX1 630 aaPredicted RBP15.68■□□□□ 0.1
APOC1-209ENST00000592885 ASB14A6NK59 587 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 POTEB2H3BUK9 544 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 NMT2O60551 498 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 TOP1P11387 765 aaKnown RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 KCTD1Q719H9 257 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 ZNF589Q86UQ0 364 aaPredicted RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 PCSK9Q8NBP7 692 aaKnown RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 LENG1Q96BZ8 264 aaPredicted RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 TOX2Q96NM4 488 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 UPF3AQ9H1J1 476 aaKnown RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 RNF41Q9H4P4 317 aaPredicted RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 A1CFQ9NQ94 594 aaKnown RBP15.67■□□□□ 0.1
APOC1-209ENST00000592885 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 HOMER2Q9NSB8 354 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 TACC3Q9Y6A5 838 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 MROH7Q68CQ1 1323 aa15.67■□□□□ 0.1
APOC1-209ENST00000592885 ICAM1P05362 532 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 CLTBP09497 229 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 ACLYP53396 1101 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 NKX3-2P78367 333 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 NUCB1Q02818 461 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 TLE2Q04725 743 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 CCDC96Q2M329 555 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
APOC1-209ENST00000592885 CCSAPQ6IQ19 270 aaPredicted RBP15.66■□□□□ 0.1
APOC1-209ENST00000592885 BTNL9Q6UXG8 535 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 ANKRD33Q7Z3H0 272 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 DEFB123Q8N688 67 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 RILPL2Q969X0 211 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 RANBP17Q9H2T7 1088 aaKnown RBP15.66■□□□□ 0.1
APOC1-209ENST00000592885 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 STARD7Q9NQZ5 370 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 LCTP09848 1927 aa15.66■□□□□ 0.1
APOC1-209ENST00000592885 LOC102724159A0A0B4J2E5 919 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 HIP1O00291 1037 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 KIAA0355O15063 1070 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 ALAS1P13196 640 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 GJA9P57773 515 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 PWP2Q15269 919 aaKnown RBP15.65■□□□□ 0.1
APOC1-209ENST00000592885 CCDC144BQ3MJ40 725 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
APOC1-209ENST00000592885 AKNAD1Q5T1N1 836 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 MFSD6Q6ZSS7 791 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 PLEKHM2Q8IWE5 1019 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
APOC1-209ENST00000592885 TTC14Q96N46 770 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 KATNBL1Q9H079 304 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 CCPG1Q9ULG6 757 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 ELP1O95163 1332 aa15.65■□□□□ 0.1
APOC1-209ENST00000592885 TRIM43BA6NCK2 446 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 SDSP20132 328 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 KCNA10Q16322 511 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 BADQ92934 168 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 TRIM43Q96BQ3 446 aaPredicted RBP15.64■□□□□ 0.09
APOC1-209ENST00000592885 GLT1D1Q96MS3 346 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 TMEM47Q9BQJ4 181 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 CYP39A1Q9NYL5 469 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
APOC1-209ENST00000592885 SOWAHBA6NEL2 793 aa15.63■□□□□ 0.09
APOC1-209ENST00000592885 DCDC2CA8MYV0 355 aa15.63■□□□□ 0.09
APOC1-209ENST00000592885 C6orf222P0C671 652 aaPredicted RBP15.63■□□□□ 0.09
APOC1-209ENST00000592885 CNTN2Q02246 1040 aa15.63■□□□□ 0.09
APOC1-209ENST00000592885 CCDC178Q5BJE1 867 aa15.63■□□□□ 0.09
APOC1-209ENST00000592885 SYDE2Q5VT97 1194 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms